RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 KCNK2O95069 426 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 EPOP01588 193 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 MT-ND2P03891 347 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 MMP3P08254 477 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 CD36P16671 472 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 BMPR1AP36894 532 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 CASP3P42574 277 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 SCNN1GP51170 649 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 ADAM17P78536 824 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 VAC14Q08AM6 782 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 FBXO48Q5FWF7 155 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 PNCKQ6P2M8 343 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 ZNF540Q8NDQ6 660 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 LILRB4Q8NHJ6 448 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 GTF2H4Q92759 462 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 PROX1Q92786 737 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 DCSTAMPQ9H295 470 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 NEK6Q9HC98 313 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 NPAP1Q9NZP6 1156 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 UTS2RQ9UKP6 389 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 FAM50BQ9Y247 325 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 MED16Q9Y2X0 877 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 UBA6A0AVT1 1052 aaPredicted RBP19.39■□□□□ 0.69
SDF4-205ENST00000465727 FAM172BPA6NC97 362 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 NCF1BA6NI72 391 aaPredicted RBP19.39■□□□□ 0.69
SDF4-205ENST00000465727 NCF1CA8MVU1 366 aaPredicted RBP19.39■□□□□ 0.69
SDF4-205ENST00000465727 J3KR12 359 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 NCF1P14598 390 aaPredicted RBP19.39■□□□□ 0.69
SDF4-205ENST00000465727 TGFBR2P37173 567 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 ADCYAP1R1P41586 468 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 MLLT6P55198 1093 aaPredicted RBP19.39■□□□□ 0.69
SDF4-205ENST00000465727 NR6A1Q15406 480 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 DPP9Q86TI2 863 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 GLB1L3Q8NCI6 653 aaPredicted RBP19.39■□□□□ 0.69
SDF4-205ENST00000465727 DNAJB8Q8NHS0 232 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 BLOC1S5Q8TDH9 187 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 OR2B2Q9GZK3 357 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 OPTCQ9UBM4 332 aa19.39■□□□□ 0.69
SDF4-205ENST00000465727 OR2A25A4D2G3 310 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 METTL15A6NJ78 407 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 A8MU76 341 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 FAM220BPB1ANY3 271 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 ENPP3O14638 875 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 CREG1O75629 220 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 FADS2O95864 444 aaKnown RBP19.38■□□□□ 0.69
SDF4-205ENST00000465727 PFKLP17858 780 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 ARHGDIAP52565 204 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 ERVPABLB-1P60509 514 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 MAPKAPK3Q16644 382 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 SMU1Q2TAY7 513 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 UBE2UQ5VVX9 321 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 CPZQ66K79 652 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 ATG9BQ674R7 924 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 IL27RAQ6UWB1 636 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 DET1Q7L5Y6 550 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 CHPFQ8IZ52 775 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 METTL6Q8TCB7 284 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 SLC38A4Q969I6 547 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 HMCESQ96FZ2 354 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 PPP3R2Q96LZ3 170 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 KLHL5Q96PQ7 755 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 ITPAQ9BY32 194 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 TP63Q9H3D4 680 aaPredicted RBP19.38■□□□□ 0.69
SDF4-205ENST00000465727 EVLQ9UI08 416 aaPredicted RBP19.38■□□□□ 0.69
SDF4-205ENST00000465727 EIF2B4Q9UI10 523 aaKnown RBP19.38■□□□□ 0.69
SDF4-205ENST00000465727 INVSQ9Y283 1065 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 POLR3HQ9Y535 204 aaPredicted RBP19.38■□□□□ 0.69
SDF4-205ENST00000465727 PATJQ8NI35 1801 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 OTOFQ9HC10 1997 aa19.38■□□□□ 0.69
SDF4-205ENST00000465727 ANKRD34BA5PLL1 514 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 RAD51BO15315 384 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 TBX1O43435 398 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 RHOQP17081 205 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 CD9P21926 228 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 MAGEA2P43356 314 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 TRPC1P48995 793 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 CLK1P49759 484 aaKnown RBP19.37■□□□□ 0.69
SDF4-205ENST00000465727 CSNK2BP67870 215 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 PRKCDQ05655 676 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 MAD2L1Q13257 205 aaPredicted RBP19.37■□□□□ 0.69
SDF4-205ENST00000465727 AP5B1Q2VPB7 878 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 C14orf80Q86SX3 495 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 TSPYL5Q86VY4 417 aaPredicted RBP19.37■□□□□ 0.69
SDF4-205ENST00000465727 GPSM1Q86YR5 675 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 OR13C4Q8NGS5 318 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 TMEM40Q8WWA1 233 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 NCLNQ969V3 563 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 FBXO10Q9UK96 956 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 NUDT5Q9UKK9 219 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 VPS9D1Q9Y2B5 631 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 PKP3Q9Y446 797 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 TIMM13Q9Y5L4 95 aaPredicted RBP19.37■□□□□ 0.69
SDF4-205ENST00000465727 GMPPBQ9Y5P6 360 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 DOCK4Q8N1I0 1966 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 IL6P05231 212 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 EFNA1P20827 205 aaPredicted RBP19.37■□□□□ 0.69
SDF4-205ENST00000465727 PPP3CCP48454 512 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 RUNDC3AQ59EK9 446 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 LETMD1Q6P1Q0 360 aa19.37■□□□□ 0.69
SDF4-205ENST00000465727 AMER2Q8N7J2 671 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms