RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 USP53Q70EK8 1073 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 CYS1Q717R9 158 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 KCNJ9Q92806 393 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 ATXN7L3BQ96GX2 97 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 NRSN2Q9GZP1 204 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 SEMA6CQ9H3T2 930 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 TMEM9Q9P0T7 183 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 KLHL42Q9P2K6 505 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 GALPQ9UBC7 116 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 COLEC10Q9Y6Z7 277 aa19.81■□□□□ 0.76
SKA3-205ENST00000465471 IGHV5-10-1A0A0J9YXX1 117 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 A0A1W2PNU3 283 aaPredicted RBP19.8■□□□□ 0.76
SKA3-205ENST00000465471 TMX2-CTNND1H3BSU7 103 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 C1QAP02745 245 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 AHSGP02765 367 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 PROS1P07225 676 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 GSTA2P09210 222 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 THRAP10827 490 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 ATP5DP30049 168 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 GPX6P59796 221 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 MGAT5Q09328 741 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 OTOAQ7RTW8 1153 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 LRRN4CLQ8ND94 238 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 ACVR1CQ8NER5 493 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 RSC1A1Q92681 617 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 AHCYL2Q96HN2 611 aaKnown RBP19.8■□□□□ 0.76
SKA3-205ENST00000465471 AARSD1Q9BTE6 412 aaKnown RBP19.8■□□□□ 0.76
SKA3-205ENST00000465471 RAB33BQ9H082 229 aa19.8■□□□□ 0.76
SKA3-205ENST00000465471 ESPNB1AK53 854 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 C9P02748 559 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 CAPNS1P04632 268 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 SSTR1P30872 391 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 MAGEA4P43358 317 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 CSE1LP55060 971 aaKnown RBP19.79■□□□□ 0.76
SKA3-205ENST00000465471 TIAL1Q01085 375 aaKnown RBP eCLIP19.79■□□□□ 0.76
SKA3-205ENST00000465471 TRA2AQ13595 282 aaKnown RBP eCLIP19.79■□□□□ 0.76
SKA3-205ENST00000465471 RTP5Q14D33 572 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 RELL1Q8IUW5 271 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 OR5K2Q8NHB8 316 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 GIMAP7Q8NHV1 300 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 SLC30A3Q99726 388 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 MCMBPQ9BTE3 642 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 PPANQ9NQ55 473 aaKnown RBP19.79■□□□□ 0.76
SKA3-205ENST00000465471 EPHA6Q9UF33 1036 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 FREM2Q5SZK8 3169 aa19.79■□□□□ 0.76
SKA3-205ENST00000465471 CCDC187A0A096LP49 1063 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 TRABD2BA6NFA1 517 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 CHRM3P20309 590 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 CD9P21926 228 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 MAPK9P45984 424 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 UNC5DQ6UXZ4 953 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 SLC26A11Q86WA9 606 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 CCDC25Q86WR0 208 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 PALM2Q8IXS6 379 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 TBC1D21Q8IYX1 336 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 ZBTB2Q8N680 514 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 PHC3Q8NDX5 983 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 OR5AR1Q8NGP9 310 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 JPH3Q8WXH2 748 aaPredicted RBP19.78■□□□□ 0.76
SKA3-205ENST00000465471 NCSTNQ92542 709 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 C9orf72Q96LT7 481 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 CCDC74BQ96LY2 380 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 FERD3LQ96RJ6 166 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 TWSG1Q9GZX9 223 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 CCDC68Q9H2F9 335 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 TFB2MQ9H5Q4 396 aaKnown RBP19.78■□□□□ 0.76
SKA3-205ENST00000465471 LRRC4CQ9HCJ2 640 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 SMYD2Q9NRG4 433 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 ZFATQ9P243 1243 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 CORO1CQ9ULV4 474 aaPredicted RBP19.78■□□□□ 0.76
SKA3-205ENST00000465471 ASF1AQ9Y294 204 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 PSAT1Q9Y617 370 aa19.78■□□□□ 0.76
SKA3-205ENST00000465471 ACACBO00763 2458 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 TCRBV9S1A1TA0A576 114 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 E5RI56 91 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 HGSO14964 777 aaPredicted RBP19.77■□□□□ 0.76
SKA3-205ENST00000465471 TPBGLP0DKB5 382 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 TYRP1P17643 537 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 GFERP55789 205 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 EIF3IQ13347 325 aaKnown RBP19.77■□□□□ 0.76
SKA3-205ENST00000465471 PLCL1Q15111 1095 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 RBM20Q5T481 1227 aaKnown RBP19.77■□□□□ 0.76
SKA3-205ENST00000465471 IGF2-ASQ6U949 168 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 UNQ6494/PRO21346Q6UXR6 183 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 CAPN12Q6ZSI9 719 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 ARHGAP22Q7Z5H3 698 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 PLXDC1Q8IUK5 500 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 OR52E1Q8NGJ3 308 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 CD200R1Q8TD46 325 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 FAM136AQ96C01 138 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 NXPE2Q96DL1 559 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 PRR11Q96HE9 360 aaPredicted RBP19.77■□□□□ 0.76
SKA3-205ENST00000465471 HGH1Q9BTY7 390 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 STRADBQ9C0K7 418 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 TRIT1Q9H3H1 467 aaKnown RBP19.77■□□□□ 0.76
SKA3-205ENST00000465471 DKK4Q9UBT3 224 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 DHRS7Q9Y394 339 aa19.77■□□□□ 0.76
SKA3-205ENST00000465471 IGF2RP11717 2491 aa19.77■□□□□ 0.75
SKA3-205ENST00000465471 OR5K3A6NET4 321 aa19.76■□□□□ 0.75
SKA3-205ENST00000465471 FAM159BA6NKW6 160 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms