RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 TMIGD2Q96BF3 282 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 LMLNQ96KR4 655 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 CGREF1Q99674 301 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 SLC46A2Q9BY10 475 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 ZNHIT2Q9UHR6 403 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 SLC4A7Q9Y6M7 1214 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 AGAP14A8MT82 685 aa18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 EI24O14681 340 aa18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 CCL5P13501 91 aa18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 CCR7P32248 378 aa18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 GRAMD4Q6IC98 578 aa18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 DTWD1Q8N5C7 304 aa18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 MFSD2AQ8NA29 543 aa18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 GOLM1Q8NBJ4 401 aa18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 PNPLA3Q9NST1 481 aa18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 ETAA1Q9NY74 926 aa18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 CD84Q9UIB8 345 aa18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 ANAPC2Q9UJX6 822 aa18.33■□□□□ 0.52
TSPAN4-210ENST00000464987 H3BSA7 217 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 DFNA5O60443 496 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 LAG3P18627 525 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 VARSP26640 1264 aaKnown RBP18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 CCR2P41597 374 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 LSAMPQ13449 338 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 SPATS1Q496A3 300 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 SULT1C3Q6IMI6 304 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 SUSD1Q6UWL2 747 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 FAM43BQ6ZT52 329 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 DET1Q7L5Y6 550 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 RGL4Q8IZJ4 473 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 CBARPQ8N350 705 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 KRTCAP2Q8N6L1 136 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 CLHC1Q8NHS4 586 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 ADI1Q9BV57 179 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 SOX17Q9H6I2 414 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 ZDHHC6Q9H6R6 413 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 TMEM39AQ9NV64 488 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 HCFC1R1Q9NWW0 138 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 NDUFA13Q9P0J0 144 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 SLCO3A1Q9UIG8 710 aa18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 ZNF490Q9ULM2 529 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-210ENST00000464987 K7EPI3 171 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 ARNTLO00327 626 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 EPORP19235 508 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 JAK1P23458 1154 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 MAPK8P45983 427 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 PRMT2P55345 433 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 FXNQ16595 210 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 GPR33Q49SQ1 333 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 TBPL2Q6SJ96 375 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 TPRG1Q6ZUI0 275 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 SPRED1Q7Z699 444 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 SLC22A17Q8WUG5 538 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 ASIC4Q96FT7 647 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 SCRN2Q96FV2 425 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 FBXL20Q96IG2 436 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 RNF145Q96MT1 663 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 LYSMD1Q96S90 227 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 MUC13Q9H3R2 512 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 SUV39H2Q9H5I1 410 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 IKZF5Q9H5V7 419 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 TMPRSS11EQ9UL52 423 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 LRG1P02750 347 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 UGT2B4P06133 528 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 NSG1P42857 185 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 NR1H2P55055 460 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 SNRPD1P62314 119 aaKnown RBP18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 MERTKQ12866 999 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 FAM174BQ3ZCQ3 159 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 MPP7Q5T2T1 576 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 C22orf39Q6P5X5 142 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 DNAJC14Q6Y2X3 702 aaPredicted RBP18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 DPY19L3Q6ZPD9 716 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 LIX1Q8N485 282 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 CHST14Q8NCH0 376 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 PAPD5Q8NDF8 572 aaKnown RBP18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 ECHDC3Q96DC8 303 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 RMND5BQ96G75 393 aaPredicted RBP18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 MPP4Q96JB8 637 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 PPP3R2Q96LZ3 170 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 CORO1BQ9BR76 489 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 C9orf16Q9BUW7 83 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 PADI4Q9UM07 663 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 MYRFQ9Y2G1 1151 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 CHD7Q9P2D1 2997 aa18.31■□□□□ 0.52
TSPAN4-210ENST00000464987 ULK1O75385 1050 aa18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 MTX2O75431 263 aa18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 SEC24DO94855 1032 aaPredicted RBP18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 C1SP09871 688 aa18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 ACRP10323 421 aa18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 CSF2RAP15509 400 aa18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 WDR5P61964 334 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 PWP1Q13610 501 aa18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 CPSF6Q16630 551 aaKnown RBP eCLIP18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 SPANXN4Q5MJ08 99 aa18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 LYPLAL1Q5VWZ2 237 aa18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 TMEM25Q86YD3 366 aa18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 VRK3Q8IV63 474 aa18.3■□□□□ 0.52
TSPAN4-210ENST00000464987 PACRGLQ8N7B6 248 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms