RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ABRQ12979 859 aa19.22■□□□□ 0.67
VARS-221ENST00000463184 GLIS1Q8NBF1 620 aa19.22■□□□□ 0.67
VARS-221ENST00000463184 OR4K2Q8NGD2 314 aa19.22■□□□□ 0.67
VARS-221ENST00000463184 QKIQ96PU8 341 aaKnown RBP eCLIP19.22■□□□□ 0.67
VARS-221ENST00000463184 SLC29A3Q9BZD2 475 aa19.22■□□□□ 0.67
VARS-221ENST00000463184 TSGA10Q9BZW7 698 aa19.22■□□□□ 0.67
VARS-221ENST00000463184 ACTR5Q9H9F9 607 aaPredicted RBP19.22■□□□□ 0.67
VARS-221ENST00000463184 PCMTD2Q9NV79 361 aa19.22■□□□□ 0.67
VARS-221ENST00000463184 SERTAD3Q9UJW9 196 aa19.22■□□□□ 0.67
VARS-221ENST00000463184 SHANK1Q9Y566 2161 aa19.22■□□□□ 0.67
VARS-221ENST00000463184 C17orf113A0A1B0GUU1 675 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 AGAP14A8MT82 685 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 SGTAO43765 313 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 ANXA9O76027 345 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 ZRANB2O95218 330 aaKnown RBP eCLIP19.21■□□□□ 0.67
VARS-221ENST00000463184 DDAH2O95865 285 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 CCDC175P0C221 793 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 CYP2A7P20853 494 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 PRDX3P30048 256 aaKnown RBP19.21■□□□□ 0.67
VARS-221ENST00000463184 PREPP48147 710 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 PRLHRP49683 370 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 ITGA1P56199 1179 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 C11orf63Q6NUN7 778 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 FAM198BQ6UWH4 519 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 DAAM2Q86T65 1068 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 SYTL1Q8IYJ3 562 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 RCOR2Q8IZ40 523 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 ZBTB2Q8N680 514 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 OR1L3Q8NH93 324 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 HM13Q8TCT9 377 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 NAT14Q8WUY8 206 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 LCN9Q8WX39 176 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 PNPLA2Q96AD5 504 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 ULK4Q96C45 1275 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 SMAD5Q99717 465 aaKnown RBP19.21■□□□□ 0.67
VARS-221ENST00000463184 DPH2Q9BQC3 489 aaPredicted RBP19.21■□□□□ 0.67
VARS-221ENST00000463184 NUDT9Q9BW91 350 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 FKBPLQ9UIM3 349 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 ALG6Q9Y672 507 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 SPTBP11277 2137 aa19.21■□□□□ 0.67
VARS-221ENST00000463184 hCG_1818297A0A087WSY0 165 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 GSAPA4D1B5 854 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 TCP11X1B4DZS4 312 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 DDX3YO15523 660 aaKnown RBP19.2■□□□□ 0.66
VARS-221ENST00000463184 ZNF789Q5FWF6 425 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 RANBP10Q6VN20 620 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 LILRA3Q8N6C8 439 aaPredicted RBP19.2■□□□□ 0.66
VARS-221ENST00000463184 RBMXL3Q8N7X1 1067 aaKnown RBP19.2■□□□□ 0.66
VARS-221ENST00000463184 Q8NA96 180 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 HEXDCQ8WVB3 486 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 HAUS1Q96CS2 278 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 FERD3LQ96RJ6 166 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 FICDQ9BVA6 458 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 MFRPQ9BY79 579 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 SLC7A5P2Q9GIP4 190 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 GBA3Q9H227 469 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 GPR83Q9NYM4 423 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 CRLS1Q9UJA2 301 aa19.2■□□□□ 0.66
VARS-221ENST00000463184 NOTCH2Q04721 2471 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 SEC16AO15027 2179 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 A0A0U1RQJ8 604 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 A6NL46 340 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 CFAP99D6REC4 459 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 E7EQ34 232 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 KRT86O43790 486 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 HBQ1P09105 142 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 ATP1B2P14415 290 aaPredicted RBP19.19■□□□□ 0.66
VARS-221ENST00000463184 AGXTP21549 392 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 XIAPP98170 497 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 NCF4Q15080 339 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 EIF2S3LQ2VIR3 472 aaKnown RBP19.19■□□□□ 0.66
VARS-221ENST00000463184 FAM69BQ5VUD6 431 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 SLC6A19Q695T7 634 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 ITPRIPL1Q6GPH6 555 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 ZNF662Q6ZS27 426 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 RAB43Q86YS6 212 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 KATNAL2Q8IYT4 538 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 RNF10Q8N5U6 811 aaKnown RBP19.19■□□□□ 0.66
VARS-221ENST00000463184 C19orf43Q9BQ61 176 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 FERMT1Q9BQL6 677 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 DHRS4Q9BTZ2 278 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 PITPNM3Q9BZ71 974 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 TFB2MQ9H5Q4 396 aaKnown RBP19.19■□□□□ 0.66
VARS-221ENST00000463184 CASS4Q9NQ75 786 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 C5AR2Q9P296 337 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 PADI2Q9Y2J8 665 aa19.19■□□□□ 0.66
VARS-221ENST00000463184 MACROD2A1Z1Q3 448 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 CCDC66A2RUB6 948 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 C9J4A7 227 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 IFRD1O00458 451 aaPredicted RBP19.18■□□□□ 0.66
VARS-221ENST00000463184 BTN3A3O00478 584 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 CRTAMO95727 393 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 ST6GAL1P15907 406 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 ADRA1AP35348 466 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 CD151P48509 253 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 PRR30Q53SZ7 412 aaPredicted RBP19.18■□□□□ 0.66
VARS-221ENST00000463184 CCDC50Q8IVM0 306 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 NXPE1Q8N323 547 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 SGSM3Q96HU1 749 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 RBM41Q96IZ5 413 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms