RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 TRIM54Q9BYV2 358 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 BRD8Q9H0E9 1235 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 OR10A2Q9H208 303 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 IKZF4Q9H2S9 585 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 ZDHHC6Q9H6R6 413 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 ZFP64Q9NPA5 681 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 LHX9Q9NQ69 397 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 OLAHQ9NV23 265 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 ARHGEF38Q9NXL2 777 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 ING3Q9NXR8 418 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 GPRC5BQ9NZH0 403 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 IL36AQ9UHA7 158 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 ZNHIT2Q9UHR6 403 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 FEZ2Q9UHY8 353 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 ST6GALNAC2Q9UJ37 374 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 ADAM29Q9UKF5 820 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 MED16Q9Y2X0 877 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 CUBNO60494 3623 aa3.98□□□□□ -1.77
ECHDC1-211ENST00000460558 HRNRQ86YZ3 2850 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 A0A0U1RQS6 177 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 A0A1W2PPL8 197 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 CCDC189A1A4V9 331 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 GOLGA6L3A6NEY3 463 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 TLCD2A6NGC4 264 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 INAFM1C9JVW0 142 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 H3BUI4 141 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 KPNA5O15131 536 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 EIF3DO15371 548 aaKnown RBP eCLIP3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 PIP5K1CO60331 668 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 TM7SF2O76062 418 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 TOX4O94842 621 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 ZWINTO95229 277 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 IFNA2P01563 188 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 IGLV3-27P01718 113 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 VSIG10L2P0DP72 767 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 MED14OSP0DP75 135 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 DLATP10515 647 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 P4HA1P13674 534 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 FPR1P21462 350 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 PSMA5P28066 241 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 TSFMP43897 325 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 KCNK10P57789 538 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 MYL6P60660 151 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 NUCB2P80303 420 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 ADORA2A-AS1P86434 159 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 CDC16Q13042 620 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 PEX6Q13608 980 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 NFYCQ13952 458 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 DAG1Q14118 895 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 IL11RAQ14626 422 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 IRF4Q15306 451 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 ZNF699Q32M78 642 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 TUBB8Q3ZCM7 444 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 FLYWCH1Q4VC44 716 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 HYIQ5T013 277 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 CES4AQ5XG92 561 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 NADSYN1Q6IA69 706 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 PODNL1Q6PEZ8 512 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 WDR74Q6RFH5 385 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 TMEM207Q6UWW9 146 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 GFRALQ6UXV0 394 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 ZNF720Q7Z2F6 126 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 CAMKMTQ7Z624 323 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 C17orf82Q86X59 251 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 ARFGAP1Q8N6T3 406 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 BCORP1Q8N888 145 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 FBXO15Q8NCQ5 510 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 ACRBPQ8NEB7 543 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 VPS37AQ8NEZ2 397 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 CCHCR1Q8TD31 782 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 CCDC127Q96BQ5 260 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 NMD3Q96D46 503 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 MBD6Q96DN6 1003 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 RNF31Q96EP0 1072 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 SIGLEC10Q96LC7 697 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 ACCSQ96QU6 501 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 DIRC2Q96SL1 478 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 PLIN2Q99541 437 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 WDR77Q9BQA1 342 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 CBWD1Q9BRT8 395 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 TMEM121Q9BTD3 319 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 MMTAG2Q9BU76 263 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 CRB3Q9BUF7 120 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 DUSP16Q9BY84 665 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 DNAI2Q9GZS0 605 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 TMEM168Q9H0V1 697 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 XYLT2Q9H1B5 865 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 PPCSQ9HAB8 311 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 KIAA1586Q9HCI6 787 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 ABCC13Q9NSE7 274 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 TMEM140Q9NV12 185 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 PIH1D1Q9NWS0 290 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 FAM30AQ9NZY2 134 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 HMGXB4Q9UGU5 601 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 VPS51Q9UID3 782 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 SH3BGRL2Q9UJC5 107 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 VPS28Q9UK41 221 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 HS3ST2Q9Y278 367 aa3.97□□□□□ -1.77
ECHDC1-211ENST00000460558 PMF1-BGLAPU3KQ54 211 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms