RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 UROSP10746 265 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 HOXD11P31277 338 aaPredicted RBP12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 HNMTP50135 292 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 ERVK-8P63133 956 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 SNAPC2Q13487 334 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 RAPSNQ13702 412 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 GPAT3Q53EU6 434 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 FAM76BQ5HYJ3 339 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 CARNMT1Q8N4J0 409 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 OR4L1Q8NH43 312 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 MASTLQ96GX5 879 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 DUSP16Q9BY84 665 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 ZNF350Q9GZX5 532 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 ZNF451Q9Y4E5 1061 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 TEX264Q9Y6I9 313 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 HLA-DQA2P01906 255 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 PRH1P02810 166 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 MYF6P23409 242 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 AP1S2P56377 157 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 MS4A2Q01362 244 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 GALEQ14376 348 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 CLCA4Q14CN2 919 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 PGM5Q15124 567 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 TEX44Q53QW1 395 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 DCST1Q5T197 706 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 ZCCHC12Q6PEW1 402 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 BORAQ6PGQ7 559 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 AGBL3Q8NEM8 1001 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 OR10G2Q8NGC3 310 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 OR10T2Q8NGX3 314 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 CHPT1Q8WUD6 406 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 SLC38A4Q969I6 547 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 TMEM159Q96B96 161 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 GAL3ST1Q99999 423 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 TXLNGYQ9BZA5 131 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 BCAS3Q9H6U6 928 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 CCM2LQ9NUG4 571 aaPredicted RBP12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 COPZ2Q9P299 210 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 FAM234BA2RU67 622 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 SEPT4O43236 478 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 TPST2O60704 377 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 ENTPD3O75355 529 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 ARHGEF15O94989 841 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 UNGP13051 313 aaPredicted RBP12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 ARF4P18085 180 aaPredicted RBP12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 PDHA2P29803 388 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 DNAJA1P31689 397 aaKnown RBP12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 SHMT1P34896 483 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 GGT5P36269 586 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 CPTPQ5TA50 214 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 C1orf189Q5VU69 101 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 LRRC66Q68CR7 880 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 ANKRD54Q6NXT1 300 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 TMEM17Q86X19 198 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 TMEM199Q8N511 208 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 PPP1R13LQ8WUF5 828 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 GTF2H4Q92759 462 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 PFDN5Q99471 154 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 CGREF1Q99674 301 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 AIFM2Q9BRQ8 373 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 NECTIN3Q9NQS3 549 aa12.16□□□□□ -0.46
NEDD4L-208ENST00000456173 KAT6AQ92794 2004 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 YDJCA8MPS7 323 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 SIX3O95343 332 aaPredicted RBP12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 IFNW1P05000 195 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 PPIBP23284 216 aaKnown RBP12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 RAB5BP61020 215 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 OR2T5Q6IEZ7 315 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 OR2T29Q8NH02 315 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 SPATA22Q8NHS9 363 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 TRAPPC12Q8WVT3 735 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 KCTD15Q96SI1 283 aaPredicted RBP12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 SEMA3CQ99985 751 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 IPPKQ9H8X2 491 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 SMURF1Q9HCE7 757 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 ENAMQ9NRM1 1142 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 SEMA3GQ9NS98 782 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 NLKQ9UBE8 527 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 MGAT4AQ9UM21 535 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 TMEM98Q9Y2Y6 226 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 PCDHGA7Q9Y5G6 932 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 MYPNQ86TC9 1320 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 B4GAT1O43505 415 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 SLC28A2O43868 658 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 SERPINB7O75635 380 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 RP2O75695 350 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 TXNL4AP83876 142 aaKnown RBP12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 GANABQ14697 944 aaKnown RBP12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 NPY5RQ15761 445 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 XKR6Q5GH73 641 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 FOXB2Q5VYV0 432 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 PIGZQ86VD9 579 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 CAND1Q86VP6 1230 aaKnown RBP12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 DTX3Q8N9I9 347 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 OR6J1Q8NGC5 347 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 USP7Q93009 1102 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 ARMC5Q96C12 935 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 MED30Q96HR3 178 aa12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
NEDD4L-208ENST00000456173 HYLS1Q96M11 299 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms