RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ASAH2Q9NR71 780 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 SLC25A13Q9UJS0 675 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 ANAPC2Q9UJX6 822 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 POLR3HQ9Y535 204 aaPredicted RBP14.78□□□□□ -0.04
LDLR-202ENST00000455727 COMMD3-BMI1R4GMX3 469 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 STK16O75716 305 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 TIMP1P01033 207 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 ANXA5P08758 320 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 SLC2A4P14672 509 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 GJA1P17302 382 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 GDF5P43026 501 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 ATP13A5Q4VNC0 1218 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 SPRED1Q7Z699 444 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 SPDYE1Q8NFV5 336 aaPredicted RBP14.77□□□□□ -0.04
LDLR-202ENST00000455727 OR8J3Q8NGG0 315 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 USP7Q93009 1102 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 HBEGFQ99075 208 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 MAGEL2Q9UJ55 1249 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 PTPRSQ13332 1948 aa14.77□□□□□ -0.04
LDLR-202ENST00000455727 H6PDO95479 791 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 CXCL14O95715 111 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 OR56A5P0C7T3 313 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 MTHFD1P11586 935 aaKnown RBP14.77□□□□□ -0.05
LDLR-202ENST00000455727 CSF2RAP15509 400 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 LHCGRP22888 699 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 CA8P35219 290 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 GNPDA1P46926 289 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 SH3BGRP55822 239 aaPredicted RBP14.77□□□□□ -0.05
LDLR-202ENST00000455727 POLR2LP62875 67 aaKnown RBP14.77□□□□□ -0.05
LDLR-202ENST00000455727 B4GALNT1Q00973 533 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 GBX1Q14549 363 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 ATP6AP1Q15904 470 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 TMTC4Q5T4D3 741 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 THEMIS2Q5TEJ8 643 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 PLPP6Q8IY26 295 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 AADATQ8N5Z0 425 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 ZNF557Q8N988 423 aaPredicted RBP14.77□□□□□ -0.05
LDLR-202ENST00000455727 ZBTB18Q99592 522 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 CGREF1Q99674 301 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 CORO1BQ9BR76 489 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 EMILIN2Q9BXX0 1053 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 PNPLA3Q9NST1 481 aa14.77□□□□□ -0.05
LDLR-202ENST00000455727 LOC730098B7Z3J9 87 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 AOAHP28039 575 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 CCR7P32248 378 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 SPINT3P49223 89 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 RPIAP49247 311 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 NR1H2P55055 460 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 DPY19L3Q6ZPD9 716 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 EPHX4Q8IUS5 362 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 TCAIMQ8N3R3 496 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 CBR4Q8N4T8 237 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 SLC32A1Q9H598 525 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 BRD9Q9H8M2 597 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 ZNF490Q9ULM2 529 aaPredicted RBP14.76□□□□□ -0.05
LDLR-202ENST00000455727 ARHGAP10A1A4S6 786 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 MANBAO00462 879 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 DLGAP1O14490 977 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 RSL1D1O76021 490 aaKnown RBP14.76□□□□□ -0.05
LDLR-202ENST00000455727 KCNH1O95259 989 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 CLDN9O95484 217 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 C8GP07360 202 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 PCSK2P16519 638 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 HRH2P25021 359 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 DDX6P26196 483 aaKnown RBP eCLIP14.76□□□□□ -0.057e-8■■□□□ 12.4
LDLR-202ENST00000455727 RPL38P63173 70 aaKnown RBP14.76□□□□□ -0.05
LDLR-202ENST00000455727 DMC1Q14565 340 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 HABP4Q5JVS0 413 aaKnown RBP14.76□□□□□ -0.05
LDLR-202ENST00000455727 CACHD1Q5VU97 1274 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 TMEM25Q86YD3 366 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 DIS3LQ8TF46 1054 aaKnown RBP14.76□□□□□ -0.05
LDLR-202ENST00000455727 BIRC7Q96CA5 298 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 HAUS8Q9BT25 410 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 SLC12A9Q9BXP2 914 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 SMG9Q9H0W8 520 aaKnown RBP14.76□□□□□ -0.05
LDLR-202ENST00000455727 RPF2Q9H7B2 306 aaKnown RBP14.76□□□□□ -0.05
LDLR-202ENST00000455727 OLAHQ9NV23 265 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 KLQ9UEF7 1012 aa14.76□□□□□ -0.05
LDLR-202ENST00000455727 DOCK6Q96HP0 2047 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 EME2A4GXA9 379 aaPredicted RBP14.75□□□□□ -0.05
LDLR-202ENST00000455727 SAC3D1A6NKF1 404 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 WASH3PC4AMC7 463 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 H3BNH8 94 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 ACOX3O15254 700 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 NUAK1O60285 661 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 RASAL1O95294 804 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 FGF19O95750 216 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 IL6P05231 212 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 C1SP09871 688 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 LINC00271P0C7V0 271 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 NCK1P16333 377 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 ITGB8P26012 769 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 AKT1P31749 480 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 DGKQP52824 942 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 EPHA5P54756 1037 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 ARHGEF7Q14155 803 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 NADK2Q4G0N4 442 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 ASTLQ6HA08 431 aaPredicted RBP14.75□□□□□ -0.05
LDLR-202ENST00000455727 GLYATQ6IB77 296 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 KRT80Q6KB66 452 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms