RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 CLCA4Q14CN2 919 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 ZBTB6Q15916 424 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 ADPRMQ3LIE5 342 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 NECAB2Q7Z6G3 386 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 TMEM132CQ8N3T6 1108 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 OR7D4Q8NG98 312 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 PROKR1Q8TCW9 393 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 NT5C3BQ969T7 300 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 KIAA1191Q96A73 305 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 TSGA13Q96PP4 275 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 FAM193BQ96PV7 902 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 DSN1Q9H410 356 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 ELOVL6Q9H5J4 265 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 NEK6Q9HC98 313 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 ZNF490Q9ULM2 529 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 CREG1O75629 220 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 INPP1P49441 399 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 LRRC74AQ0VAA2 488 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 GALNT1Q10472 559 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 SEMA3BQ13214 749 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 MFSD10Q14728 455 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 TPRG1LQ5T0D9 272 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 SPATC1Q76KD6 591 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 RBM23Q86U06 439 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 C11orf74Q86VG3 221 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 DUS3LQ96G46 650 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 PPP3R2Q96LZ3 170 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 ZNF599Q96NL3 588 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 COPS4Q9BT78 406 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 AMBRA1Q9C0C7 1298 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 TP63Q9H3D4 680 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 SCUBE2Q9NQ36 999 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 ZIM2Q9NZV7 527 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 ZNF221Q9UK13 617 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 GABRDO14764 452 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 DNTTP04053 509 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 FGF1P05230 155 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 CTPS1P17812 591 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 SOX6P35712 828 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 DCTP40126 519 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 FAM189BP81408 668 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 CDK5R2Q13319 367 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 RFX4Q33E94 735 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 CYHR1Q6ZMK1 362 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 SVOPLQ8N434 492 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 SELENOMQ8WWX9 145 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 KCNN1Q92952 543 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 RHNO1Q9BSD3 238 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 OGDHLQ9ULD0 1010 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 PMF1-BGLAPU3KQ54 211 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 RFXANKO14593 260 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 PER2O15055 1255 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 GPR39O43194 453 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 TSC22D2O75157 780 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 POU2F1P14859 743 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 HOXB8P17481 243 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 ALDH7A1P49419 539 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 RPS3AP61247 264 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 ZNF404Q494X3 552 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 OR2T11Q8NH01 316 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 RMND5AQ9H871 391 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 DUSP12Q9UNI6 340 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 SOBPA7XYQ1 873 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 UPK3BL1B0FP48 263 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 UPK3BL2E5RIL1 263 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 DDNO94850 711 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 FGF4P08620 206 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 PFKLP17858 780 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 RUNX1T1Q06455 604 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 ZFP69Q49AA0 526 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 XAF1Q6GPH4 301 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 PM20D1Q6GTS8 502 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 DOK6Q6PKX4 331 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 CCBE1Q6UXH8 406 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 ATL1Q8WXF7 558 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 UBE2FQ969M7 185 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 UGT2B11O75310 529 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 RFPL2O75678 378 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 HLA-DPA1P20036 260 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 OR1G1P47890 313 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 STC1P52823 247 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 ERVPABLB-1P60509 514 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 GTF2H2Q13888 395 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 SEMA3AQ14563 771 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 PHKG1Q16816 387 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 GTF2H2CQ6P1K8 395 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 SLC44A2Q8IWA5 706 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 TAGAPQ8N103 731 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 AADATQ8N5Z0 425 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 IMP4Q96G21 291 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 ZNF419Q96HQ0 510 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 KCNC2Q96PR1 638 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 BEX2Q9BXY8 128 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 NSUN3Q9H649 340 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 ZBTB20Q9HC78 741 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 MARCH2Q9P0N8 246 aa13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 WBP11Q9Y2W2 641 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-210ENST00000453744 WNK3Q9BYP7 1800 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 PNMA8CA0A1B0GUJ8 204 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms