RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 HTR3DQ70Z44 454 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 ADAMTSL2Q86TH1 951 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 ITIH5Q86UX2 942 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 CACUL1Q86Y37 369 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 ADGRG5Q8IZF4 528 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 TMEM199Q8N511 208 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 FIBINQ8TAL6 211 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.51□□□□□ -0.09
SF1-211ENST00000448404 ROPN1LQ96C74 230 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 FBXL20Q96IG2 436 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 ZFYVE19Q96K21 471 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 EGLN2Q96KS0 407 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 BTBD9Q96Q07 612 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 CENPKQ9BS16 269 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 FAM126AQ9BYI3 521 aaPredicted RBP14.51□□□□□ -0.09
SF1-211ENST00000448404 SUV39H2Q9H5I1 410 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 CARS2Q9HA77 564 aaKnown RBP14.51□□□□□ -0.09
SF1-211ENST00000448404 PRM3Q9NNZ6 103 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 ARL15Q9NXU5 204 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 NUDT4Q9NZJ9 180 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 GNPTGQ9UJJ9 305 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 PTBP2Q9UKA9 531 aaKnown RBP14.51□□□□□ -0.09
SF1-211ENST00000448404 ZNF490Q9ULM2 529 aaPredicted RBP14.51□□□□□ -0.09
SF1-211ENST00000448404 VPS9D1Q9Y2B5 631 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 AXIN1O15169 862 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 RAD51BO15315 384 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 ZSCAN9O15535 394 aaPredicted RBP14.51□□□□□ -0.09
SF1-211ENST00000448404 PRAMEF4O60810 478 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 ARHGEF15O94989 841 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 S100BP04271 92 aaPredicted RBP14.51□□□□□ -0.09
SF1-211ENST00000448404 LINC00271P0C7V0 271 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 MYOGP15173 224 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 EPORP19235 508 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 TACR1P25103 407 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 MTA1Q13330 715 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 LAPTM5Q13571 262 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 CCSMST1Q4G0I0 132 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 NADK2Q4G0N4 442 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 MPPE1Q53F39 396 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 PRAMEF9Q5VWM5 478 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 TBPL2Q6SJ96 375 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 RGL4Q8IZJ4 473 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 MARVELD2Q8N4S9 558 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 STON2Q8WXE9 905 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 DUS2Q9NX74 493 aaKnown RBP14.51□□□□□ -0.09
SF1-211ENST00000448404 OPTCQ9UBM4 332 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 SUN2Q9UH99 717 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 HEMK1Q9Y5R4 338 aaPredicted RBP14.51□□□□□ -0.09
SF1-211ENST00000448404 HNRNPRO43390 633 aaKnown RBP14.51□□□□□ -0.09
SF1-211ENST00000448404 SEC22BO75396 215 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 TYRP14679 529 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 TCEAL5Q5H9L2 206 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 OTUD3Q5T2D3 398 aaPredicted RBP14.51□□□□□ -0.09
SF1-211ENST00000448404 TXNDC11Q6PKC3 985 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 CHST15Q7LFX5 561 aaPredicted RBP14.51□□□□□ -0.09
SF1-211ENST00000448404 HSD11B1LQ7Z5J1 315 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 MINDY1Q8N5J2 469 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 ACDQ96AP0 544 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 LRRC3BQ96PB8 259 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 C1QTNF3Q9BXJ4 246 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 TMEM165Q9HC07 324 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 ASAH2Q9NR71 780 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 THEGQ9P2T0 379 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 DLGAP4Q9Y2H0 992 aa14.51□□□□□ -0.09
SF1-211ENST00000448404 TANC1Q9C0D5 1861 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 DLGAP1O14490 977 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 DENRO43583 198 aaKnown RBP14.5□□□□□ -0.09
SF1-211ENST00000448404 EPCAMP16422 314 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 TPP2P29144 1249 aaPredicted RBP14.5□□□□□ -0.09
SF1-211ENST00000448404 COL9A2Q14055 689 aaPredicted RBP14.5□□□□□ -0.09
SF1-211ENST00000448404 GRM2Q14416 872 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 OGFOD2Q6N063 350 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 TMEM214Q6NUQ4 689 aaKnown RBP14.5□□□□□ -0.09
SF1-211ENST00000448404 DLEU7Q6UYE1 221 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 HS3ST5Q8IZT8 346 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 STK40Q8N2I9 435 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 LIX1Q8N485 282 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 FAM47BQ8NA70 645 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 CDC26Q8NHZ8 85 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 RNF145Q96MT1 663 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 TSSK3Q96PN8 268 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 NRTNQ99748 197 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 LIN28AQ9H9Z2 209 aaKnown RBP14.5□□□□□ -0.09
SF1-211ENST00000448404 BCAP29Q9UHQ4 241 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 PDE10AQ9Y233 779 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 CTSAP10619 480 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 PBLDP30039 288 aaPredicted RBP14.5□□□□□ -0.09
SF1-211ENST00000448404 YAP1P46937 504 aaKnown RBP14.5□□□□□ -0.09
SF1-211ENST00000448404 PREPP48147 710 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 RPIAP49247 311 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 DDX39BQ13838 428 aaKnown RBP14.5□□□□□ -0.09
SF1-211ENST00000448404 ZIK1Q3SY52 487 aaPredicted RBP14.5□□□□□ -0.09
SF1-211ENST00000448404 ZNF783Q6ZMS7 281 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 RBM44Q6ZP01 1051 aaKnown RBP14.5□□□□□ -0.09
SF1-211ENST00000448404 GALNT10Q86SR1 603 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 DTWD1Q8N5C7 304 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 ZNF784Q8NCA9 323 aaPredicted RBP14.5□□□□□ -0.09
SF1-211ENST00000448404 HIC2Q96JB3 615 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 PHF12Q96QT6 1004 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 CD244Q9BZW8 370 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms