RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, human

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-208	ENST00000448217	ATP5F1	P24539	256 aa	Predicted RBP	11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	PBLD	P30039	288 aa	Predicted RBP	11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	GLRB	P48167	497 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	CSNK1E	P49674	416 aa	Known RBP	11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	AP1S2	P56377	157 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	C21orf59	P57076	290 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	DNAJB13	P59910	316 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	NAA20	P61599	178 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	ILF3	Q12906	894 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	PCLAF	Q15004	111 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	DUOXA1	Q1HG43	343 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	UAP1L1	Q3KQV9	507 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	PLA2G4E	Q3MJ16	856 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	TUBB8	Q3ZCM7	444 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	HHAT	Q5VTY9	493 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	METTL2B	Q6P1Q9	378 aa	Known RBP	11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	RGS9BP	Q6ZS82	235 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	GPSM1	Q86YR5	675 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	SLC22A9	Q8IVM8	553 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	ANKRD42	Q8N9B4	389 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	PDPR	Q8NCN5	879 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	RAB3IL1	Q8TBN0	382 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	DLG3	Q92796	817 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	SCYL1	Q96KG9	808 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	RMDN2	Q96LZ7	410 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	FOPNL	Q96NB1	174 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	C1QTNF3	Q9BXJ4	246 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	TMEM168	Q9H0V1	697 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	CCDC134	Q9H6E4	229 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	PARVB	Q9HBI1	364 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	TMEM74B	Q9NUR3	256 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	OXSM	Q9NWU1	459 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	NUDT4	Q9NZJ9	180 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	ADAMTS6	Q9UKP5	1117 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	RNF112	Q9ULX5	631 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	PLEKHM1	Q9Y4G2	1056 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	PCDHGA5	Q9Y5G8	931 aa		11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	TDRD6	O60522	2096 aa	Known RBP	11.64	□□□□□ -0.55
SCAP-208	ENST00000448217	PCDH15	Q96QU1	1955 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	CABIN1	Q9Y6J0	2220 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	STX16-NPEPL1	H3BU86	382 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	IFRD1	O00458	451 aa	Predicted RBP	11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	STX16	O14662	325 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	KLF11	O14901	512 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	DFNA5	O60443	496 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	DLX3	O60479	287 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	EPN2	O95208	641 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	CAT	P04040	527 aa	Known RBP	11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	SLC35G4	P0C7Q5	338 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	MYL2	P10916	166 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	JUND	P17535	347 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	CYP2A7	P20853	494 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	MDH1	P40925	334 aa	Known RBP	11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	ATP1A2	P50993	1020 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	IL9R	Q01113	521 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	BNC1	Q01954	994 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	ELOC	Q15369	112 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	TGFBI	Q15582	683 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	PHKG1	Q16816	387 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	ZNF423	Q2M1K9	1284 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	TTC23L	Q6PF05	361 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	SLC23A3	Q6PIS1	610 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	ZC3H14	Q6PJT7	736 aa	Known RBP	11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	UBE2R2	Q712K3	238 aa	Predicted RBP	11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	RD3	Q7Z3Z2	195 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	MAGEC3	Q8TD91	643 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	MCOLN3	Q8TDD5	553 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	CKAP2	Q8WWK9	683 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	LRRC61	Q9BV99	259 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	TRIM54	Q9BYV2	358 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	UNK	Q9C0B0	810 aa	Known RBP	11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	CAPN10	Q9HC96	672 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	DNAJC28	Q9NX36	388 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	CPSF2	Q9P2I0	782 aa	Known RBP	11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	APOBEC3B	Q9UH17	382 aa	Known RBP	11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	PDE10A	Q9Y233	779 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	KCNK6	Q9Y257	313 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	DNAJC16	Q9Y2G8	782 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	CSNK1G3	Q9Y6M4	447 aa		11.63	□□□□□ -0.55
SCAP-208	ENST00000448217	TMEM131	Q92545	1883 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217		A0A1B0GVT2	93 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	OR5K4	A6NMS3	321 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217		A8MT66	165 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	ARHGEF33	A8MVX0	844 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	MYO1C	O00159	1063 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	FFAR2	O15552	330 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	TRIM13	O60858	407 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	SMIM24	O75264	130 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	IPO13	O94829	963 aa	Known RBP	11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	C1orf105	O95561	183 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	RPN2	P04844	631 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	F3	P13726	295 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	CTSE	P14091	401 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	SLC2A4	P14672	509 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	ALDH3A1	P30838	453 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	GGT5	P36269	586 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	ACTR1B	P42025	376 aa		11.62	□□□□□ -0.55
SCAP-208	ENST00000448217	RPIA	P49247	311 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms