RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 TAAR9Q96RI9 348 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 ASPSCR1Q9BZE9 553 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 DPH1Q9BZG8 443 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 B3GNT4Q9C0J1 378 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 RAB33BQ9H082 229 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 OR52A5Q9H2C5 316 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 TRIT1Q9H3H1 467 aaKnown RBP15.97■□□□□ 0.15
SF3A1-204ENST00000447376 SLC39A1Q9NY26 324 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 MARCH4Q9P2E8 410 aaPredicted RBP15.97■□□□□ 0.15
SF3A1-204ENST00000447376 PDP2Q9P2J9 529 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 POLG2Q9UHN1 485 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 SLC24A2Q9UI40 661 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 ASF1AQ9Y294 204 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 PCDHB11Q9Y5F2 797 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 ASPMQ8IZT6 3477 aa15.97■□□□□ 0.15
SF3A1-204ENST00000447376 CDRT15L2A8MXV6 281 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 MATN2O00339 956 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 EIF3HO15372 352 aaKnown RBP eCLIP15.96■□□□□ 0.15
SF3A1-204ENST00000447376 MAP3K7O43318 606 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 TLX3O43711 291 aaPredicted RBP15.96■□□□□ 0.15
SF3A1-204ENST00000447376 C9P02748 559 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 ANKRD34CP0C6C1 535 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 ITGB6P18564 788 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 CD82P27701 267 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 PLTPP55058 493 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 GUCY2DQ02846 1103 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 HSPA14Q0VDF9 509 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 PDIA2Q13087 525 aaKnown RBP15.96■□□□□ 0.15
SF3A1-204ENST00000447376 DCAF12Q5T6F0 453 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 CACHD1Q5VU97 1274 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 ZNF470Q6ECI4 717 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 DUS1LQ6P1R4 473 aaKnown RBP15.96■□□□□ 0.15
SF3A1-204ENST00000447376 TTC23LQ6PF05 361 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 CEP128Q6ZU80 1094 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 MICALCLQ6ZW33 695 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 OTOAQ7RTW8 1153 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 SKA2Q8WVK7 121 aaPredicted RBP15.96■□□□□ 0.15
SF3A1-204ENST00000447376 RSC1A1Q92681 617 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 ART4Q93070 314 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 PRR11Q96HE9 360 aaPredicted RBP15.96■□□□□ 0.15
SF3A1-204ENST00000447376 C9orf72Q96LT7 481 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 TEFMQ96QE5 360 aaKnown RBP15.96■□□□□ 0.15
SF3A1-204ENST00000447376 CD180Q99467 661 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 FAM167BQ9BTA0 163 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 FAM129AQ9BZQ8 928 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 SRMSQ9H3Y6 488 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 FAM114A2Q9NRY5 505 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 C20orf96Q9NUD7 363 aaPredicted RBP15.96■□□□□ 0.15
SF3A1-204ENST00000447376 INTS10Q9NVR2 710 aaKnown RBP15.96■□□□□ 0.15
SF3A1-204ENST00000447376 HRASLS2Q9NWW9 162 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 GRHL1Q9NZI5 618 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 EPHA6Q9UF33 1036 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 ZC3H7BQ9UGR2 993 aaKnown RBP15.96■□□□□ 0.15
SF3A1-204ENST00000447376 FAM169AQ9Y6X4 670 aa15.96■□□□□ 0.15
SF3A1-204ENST00000447376 A0A087WV48 116 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 PRAMEF33A0A0G2JMD5 474 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 A0A1W2PNU3 283 aaPredicted RBP15.95■□□□□ 0.14
SF3A1-204ENST00000447376 OR5K3A6NET4 321 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 B4E171 279 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 GOLGA8KD6RF30 607 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 E5RI56 91 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 GOLGA8TH3BQL2 631 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 ESR1P03372 595 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 PDHA2P29803 388 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 DEKP35659 375 aaKnown RBP15.95■□□□□ 0.14
SF3A1-204ENST00000447376 TSPAN7P41732 249 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 ELK3P41970 407 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 ARCN1P48444 511 aaKnown RBP15.95■□□□□ 0.14
SF3A1-204ENST00000447376 CSE1LP55060 971 aaKnown RBP15.95■□□□□ 0.14
SF3A1-204ENST00000447376 UCNP55089 124 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 GFERP55789 205 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 CBLBQ13191 982 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 CRYMQ14894 314 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 TYSND1Q2T9J0 566 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 MSS51Q4VC12 460 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 ARHGAP22Q7Z5H3 698 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 TBC1D21Q8IYX1 336 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 NOA1Q8NC60 698 aaKnown RBP15.95■□□□□ 0.14
SF3A1-204ENST00000447376 UBXN4Q92575 508 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 USP7Q93009 1102 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 NAF1Q96HR8 494 aaKnown RBP15.95■□□□□ 0.14
SF3A1-204ENST00000447376 FOPNLQ96NB1 174 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 FCRL3Q96P31 734 aaPredicted RBP15.95■□□□□ 0.14
SF3A1-204ENST00000447376 ZPBPQ9BS86 351 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 HGH1Q9BTY7 390 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 PHACTR1Q9C0D0 580 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 OGFRQ9NZT2 677 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 TEX264Q9Y6I9 313 aa15.95■□□□□ 0.14
SF3A1-204ENST00000447376 ZCWPW2A0A1B0GU75 182 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 SLC5A10A0PJK1 596 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 PMS2P1A4D2B8 440 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 OR6C74A6NCV1 312 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 E7ESA3 106 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 TP73O15350 636 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 PRAMEF10O60809 474 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 CCL4P13236 92 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 ARNTP27540 789 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 FMO4P31512 558 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 SEPHS1P49903 392 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 ZNF658BQ4V348 819 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms