RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PRNPP04156 253 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 EPORP19235 508 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 SLC7A2P52569 658 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 IRX1P78414 480 aaPredicted RBP17.09■□□□□ 0.33
SMC6-206ENST00000446852 TANGO2Q6ICL3 276 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 METTL2BQ6P1Q9 378 aaKnown RBP17.09■□□□□ 0.33
SMC6-206ENST00000446852 ARRDC3Q96B67 414 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 AP2M1Q96CW1 435 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 ASB9Q96DX5 294 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 GPATCH1Q9BRR8 931 aaKnown RBP17.09■□□□□ 0.33
SMC6-206ENST00000446852 PBX4Q9BYU1 374 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 PCDHAC1Q9H158 963 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 IGFLR1Q9H665 355 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 RAD18Q9NS91 495 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 CCL27Q9Y4X3 112 aa17.09■□□□□ 0.33
SMC6-206ENST00000446852 PLK4O00444 970 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 C8GP07360 202 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 ENO2P09104 434 aaPredicted RBP17.08■□□□□ 0.33
SMC6-206ENST00000446852 MPC1LP0DKB6 136 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 EPB42P16452 691 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 CTSCP53634 463 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 YBX1P67809 324 aaKnown RBP17.08■□□□□ 0.33
SMC6-206ENST00000446852 GRIK2Q13002 908 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 ZNF234Q14588 700 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 PDCD4Q53EL6 469 aaKnown RBP17.08■□□□□ 0.33
SMC6-206ENST00000446852 PIP4K2CQ8TBX8 421 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 GLYATL1Q969I3 302 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 VPS33AQ96AX1 596 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 SPDL1Q96EA4 605 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 VPS35Q96QK1 796 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 ZNF184Q99676 751 aaPredicted RBP17.08■□□□□ 0.33
SMC6-206ENST00000446852 NTMT1Q9BV86 223 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 ZDHHC4Q9NPG8 344 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 FARSBQ9NSD9 589 aaKnown RBP17.08■□□□□ 0.33
SMC6-206ENST00000446852 GMPR2Q9P2T1 348 aaKnown RBP17.08■□□□□ 0.33
SMC6-206ENST00000446852 FAM8A1Q9UBU6 413 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 COQ6Q9Y2Z9 468 aa17.08■□□□□ 0.33
SMC6-206ENST00000446852 EDDM13A0A1B0GTR0 161 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 LOC730098B7Z3J9 87 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 GFYI3L273 518 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 AP2A2O94973 939 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 GGT5P36269 586 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 CDKL1Q00532 357 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 TRIM25Q14258 630 aaKnown RBP17.08■□□□□ 0.32
SMC6-206ENST00000446852 NR6A1Q15406 480 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 CDKL4Q5MAI5 379 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 VITQ6UXI7 678 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 RASGEF1AQ8N9B8 481 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 COQ10AQ96MF6 247 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 P2RY13Q9BPV8 354 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 NKX2-4Q9H2Z4 354 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 TRPV4Q9HBA0 871 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 HEBP1Q9NRV9 189 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 GDE1Q9NZC3 331 aa17.08■□□□□ 0.32
SMC6-206ENST00000446852 WNT9AO14904 365 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 SLC22A3O75751 556 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 ITGB7P26010 798 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 IL12AP29459 219 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 MAGEA10P43363 369 aaPredicted RBP17.07■□□□□ 0.32
SMC6-206ENST00000446852 EIF4HQ15056 248 aaKnown RBP17.07■□□□□ 0.32
SMC6-206ENST00000446852 LPCAT4Q643R3 524 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 IZUMO2Q6UXV1 221 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 TERB1Q8NA31 727 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 PROKR1Q8TCW9 393 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 TIFAQ96CG3 184 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 TMEM245Q9H330 911 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 SPTBN5Q9NRC6 3674 aaKnown RBP17.07■□□□□ 0.32
SMC6-206ENST00000446852 A0A1W2PP18 115 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 KPNA5O15131 536 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 INPP4BO15327 924 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 TSPAN6O43657 245 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 EBLN1P0CF75 366 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 CAPRIN1Q14444 709 aaKnown RBP17.07■□□□□ 0.32
SMC6-206ENST00000446852 RFTN2Q52LD8 501 aaPredicted RBP17.07■□□□□ 0.32
SMC6-206ENST00000446852 C6orf10Q5SRN2 563 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 LDLRAP1Q5SW96 308 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 GPR149Q86SP6 731 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 CHCHD4Q8N4Q1 142 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 TMIEQ8NEW7 156 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 OR8D1Q8WZ84 308 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 ERLEC1Q96DZ1 483 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 DTD2Q96FN9 168 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 FAM129BQ96TA1 746 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 ACTL8Q9H568 366 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 SLC32A1Q9H598 525 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 KLQ9UEF7 1012 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 TRPS1Q9UHF7 1281 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 PSMD13Q9UNM6 376 aa17.07■□□□□ 0.32
SMC6-206ENST00000446852 PSMD11O00231 422 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 NME4O00746 187 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 SOD1P00441 154 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 FTH1P02794 183 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 PEX2P28328 305 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 OPRD1P41143 372 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 SLC6A12P48065 614 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 KCNK10P57789 538 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 EMX2Q04743 252 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 SP140Q13342 867 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 ELAVL3Q14576 367 aaKnown RBP17.06■□□□□ 0.32
SMC6-206ENST00000446852 PDGFRLQ15198 375 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms