RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 DPAGT1Q9H3H5 408 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 MRPL17Q9NRX2 175 aaKnown RBP18.34■□□□□ 0.53
SHANK3-203ENST00000445220 IKZF2Q9UKS7 526 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 RIIAD1A6NNX1 92 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 NME6O75414 186 aaPredicted RBP18.34■□□□□ 0.53
SHANK3-203ENST00000445220 OR4F21O95013 312 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 CXCR3P49682 368 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 NAT8LQ8N9F0 302 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 PIWIL1Q96J94 861 aaKnown RBP18.34■□□□□ 0.53
SHANK3-203ENST00000445220 OR52B2Q96RD2 323 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 TRIM2Q9C040 744 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 XKR8Q9H6D3 395 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 HMGXB4Q9UGU5 601 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.34■□□□□ 0.53
SHANK3-203ENST00000445220 ABHD14A-ACY1A0A1B0GW23 586 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 OR6C75A6NL08 312 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 H3BM21 787 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 CHRNB2P17787 502 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 RBM34P42696 430 aaKnown RBP18.34■□□□□ 0.53
SHANK3-203ENST00000445220 GPD2P43304 727 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 CEBPGP53567 150 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 ZNF45Q02386 682 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 USF2Q15853 346 aaPredicted RBP18.34■□□□□ 0.53
SHANK3-203ENST00000445220 CMPK2Q5EBM0 449 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 HDAC2Q92769 488 aaKnown RBP18.34■□□□□ 0.53
SHANK3-203ENST00000445220 FEM1CQ96JP0 617 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 FCRL2Q96LA5 508 aaPredicted RBP18.34■□□□□ 0.53
SHANK3-203ENST00000445220 MND1Q9BWT6 205 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 ALG5Q9Y673 324 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 ADAMTSL3P82987 1691 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 HTRA2O43464 458 aaPredicted RBP18.34■□□□□ 0.53
SHANK3-203ENST00000445220 SNAPC5O75971 98 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 CSTF2P33240 577 aaKnown RBP eCLIP18.34■□□□□ 0.53
SHANK3-203ENST00000445220 CLCN2P51788 898 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 C9orf57Q5W0N0 161 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 C1QTNF7Q9BXJ2 289 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 MMP27Q9H306 513 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 TMLHEQ9NVH6 421 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 ACTR3BQ9P1U1 418 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 MYO5BQ9ULV0 1848 aa18.33■□□□□ 0.53
SHANK3-203ENST00000445220 PITPNM1O00562 1244 aa18.33■□□□□ 0.53
SHANK3-203ENST00000445220 ERP29P30040 261 aaKnown RBP18.33■□□□□ 0.53
SHANK3-203ENST00000445220 DNAJA1P31689 397 aaKnown RBP18.33■□□□□ 0.53
SHANK3-203ENST00000445220 FAM174BQ3ZCQ3 159 aa18.33■□□□□ 0.53
SHANK3-203ENST00000445220 LBX2Q6XYB7 198 aa18.33■□□□□ 0.53
SHANK3-203ENST00000445220 RTL4Q6ZR62 310 aa18.33■□□□□ 0.53
SHANK3-203ENST00000445220 ASB18Q6ZVZ8 466 aa18.33■□□□□ 0.53
SHANK3-203ENST00000445220 MARVELD2Q8N4S9 558 aa18.33■□□□□ 0.53
SHANK3-203ENST00000445220 BPIFB1Q8TDL5 484 aa18.33■□□□□ 0.53
SHANK3-203ENST00000445220 IL1RAPQ9NPH3 570 aa18.33■□□□□ 0.53
SHANK3-203ENST00000445220 MGAT4AQ9UM21 535 aa18.33■□□□□ 0.53
SHANK3-203ENST00000445220 SLURP2P0DP57 97 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 FOXM1Q08050 763 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 CCSAPQ6IQ19 270 aaPredicted RBP18.33■□□□□ 0.52
SHANK3-203ENST00000445220 ADGRG6Q86SQ4 1221 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 TRPM4Q8TD43 1214 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 XAGE5Q8WWM1 108 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 AGO3Q9H9G7 860 aaKnown RBP18.33■□□□□ 0.52
SHANK3-203ENST00000445220 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.33■□□□□ 0.52
SHANK3-203ENST00000445220 LOC100130705A0A1B0GUX0 176 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 GTF2H2Q13888 395 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 GTF2H2CQ6P1K8 395 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 TOMM5Q8N4H5 51 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 PPP1R16AQ96I34 528 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 KLHL5Q96PQ7 755 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 FAM105AQ9NUU6 356 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 KCTD5Q9NXV2 234 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 OR10H1Q9Y4A9 318 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 MAP4K5Q9Y4K4 846 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 SAGP10523 405 aaPredicted RBP18.33■□□□□ 0.52
SHANK3-203ENST00000445220 NMBRP28336 390 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 TAS2R39P59534 338 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 KLF1Q13351 362 aaPredicted RBP18.33■□□□□ 0.52
SHANK3-203ENST00000445220 TBRG1Q3YBR2 411 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 HSD17B12Q53GQ0 312 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 RHBDF2Q6PJF5 856 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 FAM151BQ6UXP7 276 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 DCBLD1Q8N8Z6 715 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 PIGXQ8TBF5 258 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 BSNDQ8WZ55 320 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 AZIN2Q96A70 460 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 RC3H2Q9HBD1 1191 aaKnown RBP18.33■□□□□ 0.52
SHANK3-203ENST00000445220 TVP23BQ9NYZ1 205 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 MAB21L2Q9Y586 359 aa18.33■□□□□ 0.52
SHANK3-203ENST00000445220 TRAV19A0A0A6YYK7 116 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 L7N2F9 121 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 MAGEB3O15480 346 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 C4BPAP04003 597 aaKnown RBP18.32■□□□□ 0.52
SHANK3-203ENST00000445220 BTBD16Q32M84 506 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 IQCF2Q8IXL9 164 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 FAM84AQ96KN4 292 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 MCMBPQ9BTE3 642 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 ZNF780BQ9Y6R6 833 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 RBM47A0AV96 593 aaKnown RBP18.32■□□□□ 0.52
SHANK3-203ENST00000445220 AP2S1P53680 142 aaPredicted RBP18.32■□□□□ 0.52
SHANK3-203ENST00000445220 ERVK-8P63133 956 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 BTN3A2P78410 334 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 CHSY3Q70JA7 882 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 MON1AQ86VX9 555 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 ANKRD46Q86W74 232 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms