RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 PSMC3P17980 439 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 GJA4P35212 333 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 OPRD1P41143 372 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 KCNK10P57789 538 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 SESN3P58005 492 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 CREB5Q02930 508 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 CCNIQ14094 377 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 C18orf21Q32NC0 220 aaPredicted RBP15.36■□□□□ 0.05
SNX13-204ENST00000444712 TMEM52BQ4KMG9 183 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 ATAT1Q5SQI0 421 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 FAM46CQ5VWP2 391 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 NLRP8Q86W28 1048 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 FUNDC1Q8IVP5 155 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 ARRDC3Q96B67 414 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 TMEM159Q96B96 161 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 NUS1Q96E22 293 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 CDK15Q96Q40 435 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 HOPXQ9BPY8 73 aaPredicted RBP15.36■□□□□ 0.05
SNX13-204ENST00000444712 EPS15L1Q9UBC2 864 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 SUCOQ9UBS9 1254 aaKnown RBP15.36■□□□□ 0.05
SNX13-204ENST00000444712 PCDHGA7Q9Y5G6 932 aa15.36■□□□□ 0.05
SNX13-204ENST00000444712 AREL1O15033 823 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 SYNCRIPO60506 623 aaKnown RBP15.35■□□□□ 0.05
SNX13-204ENST00000444712 GSTM1P09488 218 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 PCSK2P16519 638 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 THOP1P52888 689 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 GSTM4Q03013 218 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 EMX2Q04743 252 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 FOXM1Q08050 763 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 FLOT2Q14254 428 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 CMPK2Q5EBM0 449 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 C6orf136Q5SQH8 315 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 CES5AQ6NT32 575 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 ZFP1Q6P2D0 407 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 ERN2Q76MJ5 926 aaKnown RBP15.35■□□□□ 0.05
SNX13-204ENST00000444712 FNDC5Q8NAU1 212 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 OR9I1Q8NGQ6 314 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 KCNV2Q8TDN2 545 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 RSRC1Q96IZ7 334 aaKnown RBP15.35■□□□□ 0.05
SNX13-204ENST00000444712 FAM129BQ96TA1 746 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 ACOX2Q99424 681 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 CCM2Q9BSQ5 444 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 HDAC8Q9BY41 377 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 VCX3BQ9H321 246 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 ADA2Q9NZK5 511 aa15.35■□□□□ 0.05
SNX13-204ENST00000444712 NPC1O15118 1278 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 NVLO15381 856 aaKnown RBP15.34■□□□□ 0.05
SNX13-204ENST00000444712 SGTAO43765 313 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 MTX2O75431 263 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 APODP05090 189 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 MAP4P27816 1152 aaKnown RBP15.34■□□□□ 0.05
SNX13-204ENST00000444712 GRIA2P42262 883 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 DPTQ07507 201 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 MESP2Q0VG99 397 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 TMEM115Q12893 351 aaPredicted RBP15.34■□□□□ 0.05
SNX13-204ENST00000444712 MUM1Q2TAK8 710 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 SPATS1Q496A3 300 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 GGTA1PQ4G0N0 100 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 SAMD4BQ5PRF9 694 aaKnown RBP15.34■□□□□ 0.05
SNX13-204ENST00000444712 SYCE2Q6PIF2 218 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 BLOC1S3Q6QNY0 202 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 GALNT13Q8IUC8 556 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 ATL1Q8WXF7 558 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 WRAP53Q9BUR4 548 aaKnown RBP15.34■□□□□ 0.05
SNX13-204ENST00000444712 HEBP1Q9NRV9 189 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 GIMAP2Q9UG22 337 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 ITM2BQ9Y287 266 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 LRRC42Q9Y546 428 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 ZFC3H1O60293 1989 aaKnown RBP15.34■□□□□ 0.05
SNX13-204ENST00000444712 GRXCR2A6NFK2 248 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 EPOPA6NHQ4 379 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 OR2AG2A6NM03 316 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 IFRD1O00458 451 aaPredicted RBP15.34■□□□□ 0.05
SNX13-204ENST00000444712 LZTS3O60299 673 aaPredicted RBP15.34■□□□□ 0.05
SNX13-204ENST00000444712 SLC22A3O75751 556 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 KAT7O95251 611 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 CLDN9O95484 217 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 STAMBPO95630 424 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 KRT6AP02538 564 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 KRT6BP04259 564 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 KRT6CP48668 564 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 HYAL1Q12794 435 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 NR6A1Q15406 480 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 MAP7D1Q3KQU3 841 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 BCL7AQ4VC05 210 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 C8orf82Q6P1X6 216 aaPredicted RBP15.34■□□□□ 0.05
SNX13-204ENST00000444712 Q6ZSR9 355 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 KBTBD6Q86V97 674 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 RASGRP3Q8IV61 690 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 OR2T11Q8NH01 316 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 CXorf40AQ8TE69 158 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 ASB9Q96DX5 294 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 ZNF514Q96K75 400 aaPredicted RBP15.34■□□□□ 0.05
SNX13-204ENST00000444712 FOPNLQ96NB1 174 aa15.34■□□□□ 0.05
SNX13-204ENST00000444712 PRRC2BQ5JSZ5 2229 aaKnown RBP15.34■□□□□ 0.05
SNX13-204ENST00000444712 SPINT1O43278 529 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 MAP3K7O43318 606 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 ULK1O75385 1050 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 BCAS2O75934 225 aaPredicted RBP15.33■□□□□ 0.04
SNX13-204ENST00000444712 CATP04040 527 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms