RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SATB2Q9UPW6 733 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 CDYLQ9Y232 598 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 AK5Q9Y6K8 562 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 PLD2O14939 933 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 KDM1AO60341 852 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 ANKRD34CP0C6C1 535 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 ITGB6P18564 788 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 ATP5DP30049 168 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 MAPK9P45984 424 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 CYP4F3Q08477 520 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 BRD3Q15059 726 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 PLCL1Q15111 1095 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 C3orf38Q5JPI3 329 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 PHF19Q5T6S3 580 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 DUS1LQ6P1R4 473 aaKnown RBP14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 OTOAQ7RTW8 1153 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 ARHGAP22Q7Z5H3 698 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 TBC1D21Q8IYX1 336 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 ZBED8Q8IZ13 594 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 KRT222Q8N1A0 295 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 FBXO39Q8N4B4 442 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 FBXO36Q8NEA4 188 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 OR5K2Q8NHB8 316 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 GSDMBQ8TAX9 411 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 KCNJ9Q92806 393 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 CFAP36Q96G28 342 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 ZDHHC12Q96GR4 267 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 PRR11Q96HE9 360 aaPredicted RBP14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 CCDC74BQ96LY2 380 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 SLC46A1Q96NT5 459 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 B3GNT4Q9C0J1 378 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 PLAC1Q9HBJ0 212 aa14.65□□□□□ -0.06
CSNK1E-210ENST00000442216 A0A1W2PNU3 283 aaPredicted RBP14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 E5RI56 91 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 RPN2P04844 631 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 MPOP05164 745 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 ERVK-10P10266 1014 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 TYRP1P17643 537 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 CHRM3P20309 590 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 PLTPP55058 493 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 ERVPABLB-1P60509 514 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 GBX1Q14549 363 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 ZNF789Q5FWF6 425 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 HP1BP3Q5SSJ5 553 aaPredicted RBP14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 UNC5DQ6UXZ4 953 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 NAPRTQ6XQN6 538 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 CYS1Q717R9 158 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 OOSP2Q86WS3 158 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 ANKMY2Q8IV38 441 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 UNC5BQ8IZJ1 945 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 AGBL5Q8NDL9 886 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 FBXO25Q8TCJ0 367 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 PYROXD1Q8WU10 500 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 RSC1A1Q92681 617 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 ZNF578Q96N58 590 aaPredicted RBP14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 TRIT1Q9H3H1 467 aaKnown RBP14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 FBXO6Q9NRD1 293 aaPredicted RBP14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 FAM114A2Q9NRY5 505 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 MOCS1Q9NZB8 636 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 TMEM9Q9P0T7 183 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 CORO1CQ9ULV4 474 aaPredicted RBP14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 ASF1AQ9Y294 204 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 LOXL2Q9Y4K0 774 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 AKAP13Q12802 2813 aa14.64□□□□□ -0.07
CSNK1E-210ENST00000442216 TPRP12270 2363 aaKnown RBP14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 PCM1Q15154 2024 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 OR5K3A6NET4 321 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 MATN2O00339 956 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 CAPN5O15484 640 aaPredicted RBP14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 BRINP1O60477 761 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 NIPSNAP2O75323 286 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 HAUS5O94927 633 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 ITGA2BP08514 1039 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 GSTA2P09210 222 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 JMJD7P0C870 316 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 CD9P21926 228 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 RBMS1P29558 406 aaKnown RBP14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 CSTF2P33240 577 aaKnown RBP eCLIP14.63□□□□□ -0.071e-7■□□□□ 9.2
CSNK1E-210ENST00000442216 CARSP49589 748 aaKnown RBP14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 SLC7A5Q01650 507 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 ILF2Q12905 390 aaKnown RBP14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 C16orf72Q14CZ0 275 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 FASTKD3Q14CZ7 662 aaKnown RBP14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 TEDDM1Q5T9Z0 273 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 ZDHHC24Q6UX98 284 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 PRSS42Q7Z5A4 293 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 PROSER1Q86XN7 944 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 VRK3Q8IV63 474 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 CARFQ8N187 725 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 PHC3Q8NDX5 983 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 MDM1Q8TC05 714 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 LCN9Q8WX39 176 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 ZCCHC14Q8WYQ9 949 aaKnown RBP14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 C9orf72Q96LT7 481 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 CD180Q99467 661 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 SAYSD1Q9NPB0 183 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 THSD1Q9NS62 852 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 NSMCE4AQ9NXX6 385 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 SEMA5BQ9P283 1151 aa14.63□□□□□ -0.07
CSNK1E-210ENST00000442216 CEP295Q9C0D2 2601 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms