RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 MBD3L2Q8NHZ7 208 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ST8SIA4Q92187 359 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 RAPGEF5Q92565 580 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CTHRC1Q96CG8 243 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 HPDLQ96IR7 371 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 CPB2Q96IY4 423 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 RSRC1Q96IZ7 334 aaKnown RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 C7orf26Q96N11 449 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 SERPINB12Q96P63 405 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 TRAPPC9Q96Q05 1148 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 XPO6Q96QU8 1125 aaKnown RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 TREX2Q9BQ50 279 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 SELENOSQ9BQE4 189 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ADPGKQ9BRR6 497 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 C16orf70Q9BSU1 422 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 FRMD8P1Q9BZ68 369 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 GPR63Q9BZJ6 419 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ELOVL4Q9GZR5 314 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 MIS12Q9H081 205 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 SDCBP2Q9H190 292 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLC25A32Q9H2D1 315 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 PDZD7Q9H5P4 517 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 SYNCQ9H7C4 482 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 MINDY3Q9H8M7 445 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 PLEKHA5Q9HAU0 1116 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 USP29Q9HBJ7 922 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 PREBQ9HCU5 417 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 OLA1Q9NTK5 396 aaKnown RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ASNSD1Q9NWL6 643 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 DPP3Q9NY33 737 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 WWOXQ9NZC7 414 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 MORF4L1Q9UBU8 362 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 AASSQ9UDR5 926 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLC12A6Q9UHW9 1150 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 SIX4Q9UIU6 781 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ITGA11Q9UKX5 1188 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 RIMKLBQ9ULI2 386 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 BARX2Q9UMQ3 279 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 C19orf53Q9UNZ5 99 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF148Q9UQR1 794 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 DERAQ9Y315 318 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 C2CD2Q9Y426 696 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 HS3ST3B1Q9Y662 390 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM169AQ9Y6X4 670 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 LOC285556D6RIA3 1793 aa3.48□□□□□ -1.85
HMGB3P11-201ENST00000440127 WDR90Q96KV7 1748 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ATXN2Q99700 1313 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 MYH11P35749 1972 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 COL11A1P12107 1806 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ARID2Q68CP9 1835 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 A0A1W2PPH5 198 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 C5orf60A6NFR6 353 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 PGPEP1LA6NFU8 196 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM90A20PA6NIJ5 464 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLC15A5A6NIM6 579 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 C3orf70A6NLC5 250 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 SMIM23A6NLE4 172 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 H3BNX3 289 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 J3KTA2 159 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 M0QYV0 167 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCNT2O60583 730 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 TSPAN1O60635 241 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 LRCH4O75427 683 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CSDE1O75534 798 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ACSL3O95573 720 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 NTN1O95631 604 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 TRUB2O95900 331 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 VIPP01282 170 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 VTNP04004 478 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 MMP3P08254 477 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ABHD2P08910 425 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF286BP0CG31 522 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CTSAP10619 480 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 TCF4P15884 667 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 MATN1P21941 496 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CDKN2BP42772 138 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 GPD2P43304 727 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 MAGEA4P43358 317 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 MAGEA9P43362 315 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLCO1A2P46721 670 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 GABRB2P47870 512 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CPA2P48052 419 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 VPS41P49754 854 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ARSEP51690 589 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 NDST1P52848 882 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 VCPP55072 806 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CASP6P55212 293 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 FKBP1BP68106 108 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 OGDHQ02218 1023 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLC25A11Q02978 314 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 PPARDQ03181 441 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 CFHR1Q03591 330 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 INCA1Q0VD86 236 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 GPS1Q13098 491 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 ACVR2BQ13705 512 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 SMAD1Q15797 465 aaKnown RBP3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 DCAF4L1Q3SXM0 396 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 PTPN20Q4JDL3 420 aa3.47□□□□□ -1.85
HMGB3P11-201ENST00000440127 MARCH8Q5T0T0 291 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms