RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ATL1Q8WXF7 558 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 UBE2FQ969M7 185 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 MUL1Q969V5 352 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 KIAA1191Q96A73 305 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 CDKN2AIPNLQ96HQ2 116 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 CITED4Q96RK1 184 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 TDRD1Q9BXT4 1180 aaKnown RBP8.9□□□□□ -0.98
COPB1-202ENST00000439561 PRRG3Q9BZD7 231 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 RMND5AQ9H871 391 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 REEP1Q9H902 201 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 NTN4Q9HB63 628 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 ZIM2Q9NZV7 527 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 ANKMY1Q9P2S6 941 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 ZNF221Q9UK13 617 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 INTS6Q9UL03 887 aaKnown RBP8.9□□□□□ -0.98
COPB1-202ENST00000439561 ZNF451Q9Y4E5 1061 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 ACTL7AQ9Y615 435 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 GOLGA4Q13439 2230 aaKnown RBP8.9□□□□□ -0.98
COPB1-202ENST00000439561 CENPXA8MT69 81 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 CBX4O00257 560 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 GPR39O43194 453 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 NBNO60934 754 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 ULK1O75385 1050 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 CREG1O75629 220 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 WDR47O94967 919 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 FGF4P08620 206 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 CCDC159P0C7I6 412 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 MTHFD2P13995 350 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 FDXRP22570 491 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 MC4RP32245 332 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 ZNF404Q494X3 552 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 ZFP69Q49AA0 526 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 SLC39A12Q504Y0 691 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 TIGD5Q53EQ6 642 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 TPRG1LQ5T0D9 272 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 ZFAND4Q86XD8 727 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 SVOPLQ8N434 492 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 OR4F6Q8NGB9 312 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 ZNF599Q96NL3 588 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 COPS4Q9BT78 406 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 GPR63Q9BZJ6 419 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 IKZF3Q9UKT9 509 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 PRG3Q9Y2Y8 225 aaPredicted RBP8.9□□□□□ -0.98
COPB1-202ENST00000439561 PCDHGC4Q9Y5F7 938 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 PTCH2Q9Y6C5 1203 aa8.9□□□□□ -0.98
COPB1-202ENST00000439561 NUP214P35658 2090 aaPredicted RBP8.9□□□□□ -0.99
COPB1-202ENST00000439561 ILVBLA1L0T0 632 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 ASPDHA6ND91 283 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 LOC110117498-PIK3R3F6TDL0 507 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 GABRDO14764 452 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 RGS14O43566 566 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 JRKO75564 520 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 MMP3P08254 477 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 PKMP14618 531 aaKnown RBP8.9□□□□□ -0.99
COPB1-202ENST00000439561 GGT1P19440 569 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 ADRA1AP35348 466 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 DGKEP52429 567 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 ERVPABLB-1P60509 514 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 SELENBP1Q13228 472 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 MED22Q15528 200 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 NDUFA5Q16718 116 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 HIST2H2ACQ16777 129 aaPredicted RBP8.9□□□□□ -0.99
COPB1-202ENST00000439561 BRMS1LQ5PSV4 323 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 AGAP7PQ5VUJ5 663 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 PM20D1Q6GTS8 502 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 LETMD1Q6P1Q0 360 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 CCBE1Q6UXH8 406 aaPredicted RBP8.9□□□□□ -0.99
COPB1-202ENST00000439561 MINDY2Q8NBR6 621 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 FAM83FQ8NEG4 500 aaPredicted RBP8.9□□□□□ -0.99
COPB1-202ENST00000439561 GPRC5AQ8NFJ5 357 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 OR52J3Q8NH60 311 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 IMP4Q96G21 291 aaKnown RBP8.9□□□□□ -0.99
COPB1-202ENST00000439561 SERPINB11Q96P15 392 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 ATOH8Q96SQ7 321 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 OSBPL10Q9BXB5 764 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 MRM3Q9HC36 420 aaKnown RBP8.9□□□□□ -0.99
COPB1-202ENST00000439561 IL37Q9NZH6 218 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 FKBPLQ9UIM3 349 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 PCDHB14Q9Y5E9 798 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 UBR3Q6ZT12 1888 aa8.9□□□□□ -0.99
COPB1-202ENST00000439561 ANKRD31Q8N7Z5 1873 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 LRRC37AA6NMS7 1700 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 NOTOA8MTQ0 251 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 SMPD1P17405 629 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 STC1P52823 247 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 PPP5CP53041 499 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 CASP9P55211 416 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 RPS3AP61247 264 aaKnown RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 RFX4Q33E94 735 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 KDELC1Q6UW63 502 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 USP51Q70EK9 711 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 DCP2Q8IU60 420 aaKnown RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 TMEM86AQ8N2M4 240 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 TMEM132CQ8N3T6 1108 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 AADATQ8N5Z0 425 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 OR6Q1Q8NGQ2 317 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 BPIFB1Q8TDL5 484 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 FUBP1Q96AE4 644 aaKnown RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 MCMBPQ9BTE3 642 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 BEX2Q9BXY8 128 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms