RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 DERL2Q9GZP9 239 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 OR2AG1Q9H205 316 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 LIN28AQ9H9Z2 209 aaKnown RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 MAFFQ9ULX9 164 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 A0A0U1RQS6 177 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 KLKB1P03952 638 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 HPCAL1P37235 193 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 INHBCP55103 352 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 NFATC2Q13469 925 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 MTX3Q5HYI7 312 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 NXPE1Q8N323 547 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 FBXO30Q8TB52 745 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 BDH2Q9BUT1 245 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 SLC7A5P2Q9GIP4 190 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 LINC00597Q9H2U6 94 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZNF556Q9HAH1 456 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 K7EPI3 171 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 CACNB4O00305 520 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 SLC31A1O15431 190 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 LEFTY1O75610 366 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 EPN2O95208 641 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 C8GP07360 202 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 HTR1BP28222 390 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 MAT2AP31153 395 aaKnown RBP11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 VIPR2P41587 438 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 CCT8P50990 548 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 CDKN2DP55273 166 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 TECRLQ5HYJ1 363 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 VITQ6UXI7 678 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 TSPAN14Q8NG11 270 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 FIBINQ8TAL6 211 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 MAGED4Q96JG8 741 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 SLC46A2Q9BY10 475 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZNF334Q9HCZ1 680 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 ELOVL2Q9NXB9 296 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 TRPC4Q9UBN4 977 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 ERVW-1Q9UQF0 538 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 BBIP1A8MTZ0 92 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 SMAD6O43541 496 aaKnown RBP11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 SGTAO43765 313 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 VIPR1P32241 457 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 HMGCLP35914 325 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 GDF5P43026 501 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 RGRP47804 291 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 POLR2JP52435 117 aaKnown RBP11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 GK3PQ14409 553 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 GPRC6AQ5T6X5 926 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 MTSS1LQ765P7 747 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 CCDC103Q8IW40 242 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 OSCP1Q8WVF1 389 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 STARD8Q92502 1023 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 TRMT2BQ96GJ1 504 aaKnown RBP11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 NSUN3Q9H649 340 aaKnown RBP11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 NDUFA13Q9P0J0 144 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 ANAPC2Q9UJX6 822 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 PSMD13Q9UNM6 376 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 PRDX6P30041 224 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 HPCAP84074 193 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 NCEH1Q6PIU2 408 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 EPGNQ6UW88 154 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 MRPL43Q8N983 215 aaKnown RBP11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 ARRDC2Q8TBH0 407 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 SPPL2AQ8TCT8 520 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 PANX1Q96RD7 426 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 NOL6Q9H6R4 1146 aaKnown RBP11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 SGK2Q9HBY8 427 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 PREBQ9HCU5 417 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 DAPK2Q9UIK4 370 aa11.37□□□□□ -0.59
TRAPPC9-202ENST00000438773 RP1L1Q8IWN7 2480 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 OCM2P0CE71 109 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 OCMP0CE72 109 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 HSMCR30P0CW71 290 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 CTSEP14091 401 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZNF30P17039 623 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 CXCR2P25025 360 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 TGM3Q08188 693 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 TGFBIQ15582 683 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 AAGABQ6PD74 315 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 MAVSQ7Z434 540 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 CXorf40BQ96DE9 158 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZNF641Q96N77 438 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 FERD3LQ96RJ6 166 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 HOPXQ9BPY8 73 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 NUSAP1Q9BXS6 441 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 AKTIPQ9H8T0 292 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 POLR1BQ9H9Y6 1135 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 CAPN10Q9HC96 672 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 MYRFQ9Y2G1 1151 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 COPG1Q9Y678 874 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 RFXANKO14593 260 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 TIPRLO75663 272 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 ARRB2P32121 409 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 RPL5P46777 297 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 NEK2P51955 445 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 C21orf59P57076 290 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 GRM2Q14416 872 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 KCTD11Q693B1 232 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 FRMD7Q6ZUT3 714 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 FAM47BQ8NA70 645 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 GIPC3Q8TF64 312 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms