RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 DNAJB14Q8TBM8 379 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 VOPP1Q96AW1 172 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 ISG20Q96AZ6 181 aaKnown RBP13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 GPATCH1Q9BRR8 931 aaKnown RBP13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 DUS2Q9NX74 493 aaKnown RBP13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 CNOT6Q9ULM6 557 aaKnown RBP13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 CDC14AQ9UNH5 594 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 AURKCQ9UQB9 309 aa13.64□□□□□ -0.23
PTCHD3-201ENST00000438700 H3BNH8 94 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 PRMT5O14744 637 aaPredicted RBP13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 MATN4O95460 622 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 STAMBPO95630 424 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 GUCA1CO95843 209 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 CYP17A1P05093 508 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 CCR3P51677 355 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 UFM1P61960 85 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 DHCR24Q15392 516 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 PTRHD1Q6GMV3 140 aaKnown RBP13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 BLOC1S3Q6QNY0 202 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 Q6ZVU0 165 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 SERPINA9Q86WD7 417 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 CARM1Q86X55 608 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 SPPL2CQ8IUH8 684 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 CLVS1Q8IUQ0 354 aaPredicted RBP13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 NPAS3Q8IXF0 933 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 ZNF557Q8N988 423 aaPredicted RBP13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 ST13P5Q8NFI4 369 aaPredicted RBP13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 MIPOL1Q8TD10 442 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 SORCS1Q8WY21 1168 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 PBXIP1Q96AQ6 731 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 LRRC58Q96CX6 371 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 P2RY12Q9H244 342 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 IGFLR1Q9H665 355 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 ZDHHC6Q9H6R6 413 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 CMTM6Q9NX76 183 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 DOLKQ9UPQ8 538 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 PCDHGA4Q9Y5G9 962 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 SCN8AQ9UQD0 1980 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 AKAP10O43572 662 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 COQ9O75208 318 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 KATNA1O75449 491 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 SLC6A2P23975 617 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 SLC7A1P30825 629 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 HNF1BP35680 557 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 ERVPABLB-1P60509 514 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 NAA20P61599 178 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 CBX3Q13185 183 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 KCTD21Q4G0X4 260 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 RABL3Q5HYI8 236 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 FAM78AQ5JUQ0 283 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 KRT80Q6KB66 452 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 DPY19L3Q6ZPD9 716 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 FAM47BQ8NA70 645 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 FNDC5Q8NAU1 212 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 OR2T34Q8NGX1 318 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 OR2T3Q8NH03 318 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 LKAAEAR1Q8TD35 194 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 ASIC4Q96FT7 647 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 ZNF597Q96LX8 424 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 C1QTNF3Q9BXJ4 246 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 CLPBQ9H078 707 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 ZFYVE1Q9HBF4 777 aa13.63□□□□□ -0.23
PTCHD3-201ENST00000438700 ASPDHA6ND91 283 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 RFXAPO00287 272 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 GAPDHSO14556 408 aaPredicted RBP13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 TPST1O60507 370 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 VPS4BO75351 444 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 SEC24DO94855 1032 aaPredicted RBP13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 TRIM16O95361 564 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 CLDN7O95471 211 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 CLIC3O95833 236 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 UGT1A6P19224 532 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 UGT1A1P22309 533 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 UGT1A4P22310 534 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 UGT1A3P35503 534 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 UGT1A5P35504 534 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 MAGEA8P43361 318 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 HTR6P50406 440 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 KCNK10P57789 538 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 TXNL4AP83876 142 aaKnown RBP13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 NFYCQ13952 458 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 KCNC3Q14003 757 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 DMC1Q14565 340 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 TIGD2Q4W5G0 525 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 CARD16Q5EG05 197 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 XKR7Q5GH72 579 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 OGFOD2Q6N063 350 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 STK40Q8N2I9 435 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 CYB5D2Q8WUJ1 264 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 HOPXQ9BPY8 73 aaPredicted RBP13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 CEP44Q9C0F1 390 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 ASB8Q9H765 288 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 SLC52A3Q9NQ40 469 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 AIG1Q9NVV5 245 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 SLAMF8Q9P0V8 285 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 ABCD2Q9UBJ2 740 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 PRSS21Q9Y6M0 314 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 SOCS2O14508 198 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 PRR35P0CG20 571 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 ADH5P11766 374 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms