RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 NPIPB15A6NHN6 443 aaPredicted RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 GAPDHSO14556 408 aaPredicted RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 OR7A17O14581 309 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 FFAR2O15552 330 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 MOSPD3O75425 235 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 GSNP06396 782 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 NAT2P11245 290 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 YAP1P46937 504 aaKnown RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 GSK3BP49841 420 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 POLR2JP52435 117 aaKnown RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 IST1P53990 364 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 OR4D2P58180 307 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 ERVK-21P61565 698 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 BCL2L1Q07817 233 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 TNK2Q07912 1038 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 SF1Q15637 639 aaKnown RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 MYLK3Q32MK0 819 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 ANKRD34AQ69YU3 496 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 RETSATQ6NUM9 610 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 SBSNQ6UWP8 590 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 GOLGA7Q7Z5G4 137 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 GALNT7Q86SF2 657 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 TDHQ8IZJ6 230 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 BEND7Q8N7W2 519 aaPredicted RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 FAM47BQ8NA70 645 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 DCAF4L2Q8NA75 395 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 KLQ9UEF7 1012 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 MSRAQ9UJ68 235 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 UTS2RQ9UKP6 389 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 ARIH1Q9Y4X5 557 aaPredicted RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 POLR3HQ9Y535 204 aaPredicted RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 KANSL1LA0AUZ9 987 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 DHRS12A0PJE2 317 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 ANTXRLA6NF34 631 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 SYCE1LA8MT33 242 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 C5orf67F2Z3F1 127 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 ARPC2O15144 300 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 TAPBPO15533 448 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 DENRO43583 198 aaKnown RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 ZNF821O75541 412 aaPredicted RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 EFNA1P20827 205 aaPredicted RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 ACADVLP49748 655 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 ATP6AP1LQ52LC2 224 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 LY6G5CQ5SRR4 150 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 Q6ZVU0 165 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 HTR3DQ70Z44 454 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 ZBTB46Q86UZ6 589 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 ANKRD46Q86W74 232 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 OR56A4Q8NGH8 313 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 OR2T34Q8NGX1 318 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 OR2T3Q8NH03 318 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 SCAMP4Q969E2 229 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 ASIC4Q96FT7 647 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 AURKBQ96GD4 344 aaPredicted RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 MYO19Q96H55 970 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 RNF145Q96MT1 663 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 BTBD9Q96Q07 612 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 GPATCH1Q9BRR8 931 aaKnown RBP9.3□□□□□ -0.92
CUX1-206ENST00000437600 ALG2Q9H553 416 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 ZDHHC6Q9H6R6 413 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 BCAP29Q9UHQ4 241 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 CRLS1Q9UJA2 301 aa9.3□□□□□ -0.92
CUX1-206ENST00000437600 TCRBV3S1A0A5B6 114 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 GFRA2O00451 464 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 PFDN1O60925 122 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 LRATO95237 230 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 PGLSO95336 258 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 CHEK2O96017 543 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 UGT2B4P06133 528 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 FAM58BPP0C7Q3 252 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 UROSP10746 265 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 PCSK6P29122 969 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 SLC7A1P30825 629 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 PTGER3P43115 390 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 ATP6V0D1P61421 351 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 RPL38P63173 70 aaKnown RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 SLC7A9P82251 487 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 MESP2Q0VG99 397 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 NFATC2Q13469 925 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 GTF2H2Q13888 395 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 GTDC1Q4AE62 458 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 GTF2H2CQ6P1K8 395 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 TBPL2Q6SJ96 375 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 IQCF2Q8IXL9 164 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 MARVELD2Q8N4S9 558 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 CHST14Q8NCH0 376 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 ITFG1Q8TB96 612 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 MAGEE2Q8TD90 523 aaPredicted RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 CYGBQ8WWM9 190 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 FBXL20Q96IG2 436 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 LRRC3BQ96PB8 259 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 CENPKQ9BS16 269 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 ACTL8Q9H568 366 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 RPF2Q9H7B2 306 aaKnown RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 TDP1Q9NUW8 608 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 DHRS7Q9Y394 339 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 ANGPTL3Q9Y5C1 460 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 IRAK3Q9Y616 596 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 A0A1W2PP18 115 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 LOC730098B7Z3J9 87 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms