RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 PLEKHG6Q3KR16 790 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 TTLL9Q3SXZ7 439 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 OTOP2Q7RTS6 562 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 DDX53Q86TM3 631 aaKnown RBP18.24■□□□□ 0.51
CLK1-205ENST00000434813 BBS7Q8IWZ6 715 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 TNIP2Q8NFZ5 429 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 OR2AP1Q8NGE2 309 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 OR8J3Q8NGG0 315 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 BIRC7Q96CA5 298 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 ABHD8Q96I13 439 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 PPM1MQ96MI6 270 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 LATS2Q9NRM7 1088 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 ZNF639Q9UID6 485 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 ZMYM5Q9UJ78 669 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 CLEC4EQ9ULY5 219 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 LTBP2Q14767 1821 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 CXorf51AA0A1B0GTR3 108 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 NPIPB15A6NHN6 443 aaPredicted RBP18.23■□□□□ 0.51
CLK1-205ENST00000434813 K7EPI3 171 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 SLC28A1O00337 649 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 EI24O14681 340 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 RSL1D1O76021 490 aaKnown RBP18.23■□□□□ 0.51
CLK1-205ENST00000434813 LDLRP01130 860 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 CKMP06732 381 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 PPM1AP35813 382 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 SLC7A9P82251 487 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 CYP4F8P98187 520 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 HOMEZQ8IX15 550 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 TRIML2Q8N7C3 387 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 TTC16Q8NEE8 873 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 FIBINQ8TAL6 211 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 BPIFB1Q8TDL5 484 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 MRPS31Q92665 395 aaKnown RBP18.23■□□□□ 0.51
CLK1-205ENST00000434813 VOPP1Q96AW1 172 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 MPP4Q96JB8 637 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 NSMCE2Q96MF7 247 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 NTMT1Q9BV86 223 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 CD320Q9NPF0 282 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 ASIC5Q9NY37 505 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 CFAP97Q9P2B7 532 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 EIF3LQ9Y262 564 aaKnown RBP18.23■□□□□ 0.51
CLK1-205ENST00000434813 CEPT1Q9Y6K0 416 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 ZBBXA8MT70 800 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 TULP3O75386 442 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 GNAO1P09471 354 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 EBLN1P0CF75 366 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 CBSLP0DN79 551 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 CDH1P12830 882 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 GABRR2P28476 465 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 CD70P32970 193 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 CBSP35520 551 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 DGKQP52824 942 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 MTPNP58546 118 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 SELPLGQ14242 412 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 C11orf91Q3C1V1 193 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 DGKKQ5KSL6 1271 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 GLYATQ6IB77 296 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 TRIM46Q7Z4K8 759 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 TSPAN33Q86UF1 283 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 SLC13A3Q8WWT9 602 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 RPL10LQ96L21 214 aaKnown RBP18.23■□□□□ 0.51
CLK1-205ENST00000434813 ZBTB18Q99592 522 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 KLHL42Q9P2K6 505 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 SH3BP1Q9Y3L3 701 aa18.23■□□□□ 0.51
CLK1-205ENST00000434813 DENND4CQ5VZ89 1909 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 TRIM64CA6NLI5 447 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 BMP10O95393 424 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 SLC2A4P14672 509 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 CDH2P19022 906 aaPredicted RBP18.22■□□□□ 0.51
CLK1-205ENST00000434813 SOX11P35716 441 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 NSG1P42857 185 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 GDF5P43026 501 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 CRTC1Q6UUV9 634 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 GAREM2Q75VX8 874 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 DTWD1Q8N5C7 304 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 GLB1L3Q8NCI6 653 aaPredicted RBP18.22■□□□□ 0.51
CLK1-205ENST00000434813 CCDC115Q96NT0 180 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 SLC29A3Q9BZD2 475 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 KCTD5Q9NXV2 234 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 SMPD3Q9NY59 655 aaPredicted RBP18.22■□□□□ 0.51
CLK1-205ENST00000434813 TUBA8Q9NY65 449 aaPredicted RBP18.22■□□□□ 0.51
CLK1-205ENST00000434813 INTS6Q9UL03 887 aaKnown RBP18.22■□□□□ 0.51
CLK1-205ENST00000434813 TRIM64A6NGJ6 449 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 FFAR3O14843 346 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 TEX28O15482 410 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 GPR42O15529 346 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 KCNH1O95259 989 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 PIK3CGP48736 1102 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 PTGR1Q14914 329 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 TPRG1Q6ZUI0 275 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 RIMKLAQ8IXN7 391 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 ADGRG2Q8IZP9 1017 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 AADATQ8N5Z0 425 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 GPR26Q8NDV2 337 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 ECHDC3Q96DC8 303 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 CHID1Q9BWS9 393 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 IL23AQ9NPF7 189 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.22■□□□□ 0.51
CLK1-205ENST00000434813 KLQ9UEF7 1012 aa18.22■□□□□ 0.51
CLK1-205ENST00000434813 CHRM1P11229 460 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms