RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 TAC1P20366 129 aa25.86■■□□□ 1.73
TMEM248-205ENST00000433271 RPL10P27635 214 aaKnown RBP25.86■■□□□ 1.73
TMEM248-205ENST00000433271 HOXD12P35452 270 aa25.86■■□□□ 1.73
TMEM248-205ENST00000433271 ILF3Q12906 894 aaKnown RBP eCLIP25.86■■□□□ 1.73
TMEM248-205ENST00000433271 PCLAFQ15004 111 aa25.86■■□□□ 1.73
TMEM248-205ENST00000433271 UBE2R2Q712K3 238 aaPredicted RBP25.86■■□□□ 1.73
TMEM248-205ENST00000433271 TAX1BP1Q86VP1 789 aa25.86■■□□□ 1.73
TMEM248-205ENST00000433271 DYDC1Q8WWB3 177 aa25.86■■□□□ 1.73
TMEM248-205ENST00000433271 RDH14Q9HBH5 336 aa25.86■■□□□ 1.73
TMEM248-205ENST00000433271 PARVBQ9HBI1 364 aa25.86■■□□□ 1.73
TMEM248-205ENST00000433271 ENO2P09104 434 aaPredicted RBP25.85■■□□□ 1.73
TMEM248-205ENST00000433271 MTHFD2P13995 350 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 CTSEP14091 401 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 DPP6P42658 865 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 GUCY1A3Q02108 690 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 TGFBIQ15582 683 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 PEAR1Q5VY43 1037 aaPredicted RBP25.85■■□□□ 1.73
TMEM248-205ENST00000433271 WASH2PQ6VEQ5 465 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 FRA10AC1Q70Z53 315 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 SPDYE1Q8NFV5 336 aaPredicted RBP25.85■■□□□ 1.73
TMEM248-205ENST00000433271 CFAP61Q8NHU2 1237 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 CCL4L1Q8NHW4 92 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 PIGKQ92643 395 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 ZDHHC5Q9C0B5 715 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 WASH6PQ9NQA3 447 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 APOBEC3BQ9UH17 382 aaKnown RBP25.85■■□□□ 1.73
TMEM248-205ENST00000433271 PSMD13Q9UNM6 376 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 A0A1B0GVT2 93 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 WDR91A4D1P6 747 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 IFRD1O00458 451 aaPredicted RBP25.85■■□□□ 1.73
TMEM248-205ENST00000433271 DLX3O60479 287 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 KCNA4P22459 653 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 ATP5F1P24539 256 aaPredicted RBP25.85■■□□□ 1.73
TMEM248-205ENST00000433271 AK4P27144 223 aaPredicted RBP25.85■■□□□ 1.73
TMEM248-205ENST00000433271 ALDH3A1P30838 453 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 PHKG1Q16816 387 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 CAPRIN2Q6IMN6 1127 aaKnown RBP25.85■■□□□ 1.73
TMEM248-205ENST00000433271 PRR23BQ6ZRT6 265 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 NRROSQ86YC3 692 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 NUDCD3Q8IVD9 361 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 C10orf107Q8IVU9 208 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 CCDC126Q96EE4 140 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 MECRQ9BV79 373 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 GSDMCQ9BYG8 508 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 TRIM54Q9BYV2 358 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 WWP1Q9H0M0 922 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 ERVMER34-1Q9H9K5 563 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 OXSMQ9NWU1 459 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 WDR37Q9Y2I8 494 aa25.85■■□□□ 1.73
TMEM248-205ENST00000433271 ZNF318Q5VUA4 2279 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 UBXN8O00124 270 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 SMIM24O75264 130 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 ACTR1BP42025 376 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 ACTR1AP61163 376 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 UAP1L1Q3KQV9 507 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 UNC5DQ6UXZ4 953 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 MCOLN3Q8TDD5 553 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 TFGQ92734 400 aaPredicted RBP25.84■■□□□ 1.73
TMEM248-205ENST00000433271 EXT2Q93063 718 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 RMDN2Q96LZ7 410 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 PRDM8Q9NQV8 689 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 UTP6Q9NYH9 597 aaKnown RBP25.84■■□□□ 1.73
TMEM248-205ENST00000433271 TBC1D29Q9UFV1 150 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 PCOLCE2Q9UKZ9 415 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 TMCO1Q9UM00 188 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 PDE10AQ9Y233 779 aa25.84■■□□□ 1.73
TMEM248-205ENST00000433271 SUPT3HB4E1H0 165 aa25.83■■□□□ 1.73
TMEM248-205ENST00000433271 SUPT3HO75486 399 aa25.83■■□□□ 1.73
TMEM248-205ENST00000433271 CATP04040 527 aaKnown RBP25.83■■□□□ 1.73
TMEM248-205ENST00000433271 CYP2A7P20853 494 aa25.83■■□□□ 1.73
TMEM248-205ENST00000433271 RPIAP49247 311 aa25.83■■□□□ 1.73
TMEM248-205ENST00000433271 TCEA2Q15560 299 aa25.83■■□□□ 1.73
TMEM248-205ENST00000433271 SLC30A9Q6PML9 568 aa25.83■■□□□ 1.73
TMEM248-205ENST00000433271 ABRAXAS1Q6UWZ7 409 aa25.83■■□□□ 1.73
TMEM248-205ENST00000433271 NUDT4Q9NZJ9 180 aa25.83■■□□□ 1.73
TMEM248-205ENST00000433271 SIRPGQ9P1W8 387 aa25.83■■□□□ 1.73
TMEM248-205ENST00000433271 NEMP2A6NFY4 417 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 PDZK1P1A8MUH7 402 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 FFAR2O15552 330 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 KLK8O60259 260 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 SNX2O60749 519 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 HIST1H2AGP0C0S8 130 aaPredicted RBP25.82■■□□□ 1.72
TMEM248-205ENST00000433271 HIST1H2ADP20671 130 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 MAP4P27816 1152 aaKnown RBP25.82■■□□□ 1.72
TMEM248-205ENST00000433271 CTSKP43235 329 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 NFKB2Q00653 900 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 KIF19Q2TAC6 998 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 PRRT3Q5FWE3 981 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 RABEPKQ7Z6M1 372 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 SLC22A9Q8IVM8 553 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 FBXO15Q8NCQ5 510 aaPredicted RBP25.82■■□□□ 1.72
TMEM248-205ENST00000433271 CKAP2Q8WWK9 683 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 SREK1Q8WXA9 508 aaKnown RBP25.82■■□□□ 1.72
TMEM248-205ENST00000433271 HIST1H2AHQ96KK5 128 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 HIST1H2AJQ99878 128 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 H2AFJQ9BTM1 129 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 LRRC61Q9BV99 259 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 CAAP1Q9H8G2 361 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 CD274Q9NZQ7 290 aa25.82■■□□□ 1.72
TMEM248-205ENST00000433271 ASF1AQ9Y294 204 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms