RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 TNFAIP8L2Q6P589 184 aaPredicted RBP15.17■□□□□ 0.02
PTPRF-206ENST00000429895 IQCHQ86VS3 1027 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 GRHL3Q8TE85 626 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 CPT1BQ92523 772 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 CHCHD6Q9BRQ6 235 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 CARS2Q9HA77 564 aaKnown RBP15.17■□□□□ 0.02
PTPRF-206ENST00000429895 ZDHHC4Q9NPG8 344 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 HEBP2Q9Y5Z4 205 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 GLTPD2A6NH11 291 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 A8MUI8 341 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 ACP5P13686 325 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 CYP3A5P20815 502 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 SLC5A9Q2M3M2 681 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 ARL13AQ5H913 290 aaPredicted RBP15.17■□□□□ 0.02
PTPRF-206ENST00000429895 ARMC10Q8N2F6 343 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 UBE2J2Q8N2K1 259 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 SUN3Q8TAQ9 357 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 INPP4AQ96PE3 977 aaPredicted RBP15.17■□□□□ 0.02
PTPRF-206ENST00000429895 MGAT4AQ9UM21 535 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 ANXA2P2A6NMY6 339 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 CHP2O43745 196 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 ANXA2P07355 339 aaKnown RBP15.17■□□□□ 0.02
PTPRF-206ENST00000429895 MYCLP1P12525 358 aaPredicted RBP15.17■□□□□ 0.02
PTPRF-206ENST00000429895 DRG2P55039 364 aaKnown RBP15.17■□□□□ 0.02
PTPRF-206ENST00000429895 AP1S1P61966 158 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 SLC1A5Q15758 541 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 MAPK14Q16539 360 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 QPCTQ16769 361 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 SPRYD7Q5W111 196 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 CYB5D2Q8WUJ1 264 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 CDH22Q9UJ99 828 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 AK5Q9Y6K8 562 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 COL6A2P12110 1019 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 ACTR1BP42025 376 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 ACTR1AP61163 376 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 CYP2U1Q7Z449 544 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 PHF12Q96QT6 1004 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 NMUR2Q9GZQ4 415 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 S100A14Q9HCY8 104 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 IL36AQ9UHA7 158 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 SLC30A4O14863 429 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 GDI1P31150 447 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 NDST2P52849 883 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 LCP2Q13094 533 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 GPM6BQ13491 265 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 LRRC32Q14392 662 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 HEPACAMQ14CZ8 416 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 UAP1L1Q3KQV9 507 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 THAP5Q7Z6K1 395 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 SH3RF2Q8TEC5 729 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 MTERF1Q99551 399 aaKnown RBP15.16■□□□□ 0.02
PTPRF-206ENST00000429895 MOCS1Q9NZB8 636 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 CAPN8A6NHC0 703 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 INMTO95050 263 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 KHKP50053 298 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 LILRA4P59901 499 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 GANABQ14697 944 aaKnown RBP15.16■□□□□ 0.02
PTPRF-206ENST00000429895 SLC51AQ86UW1 340 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 OR6K6Q8NGW6 343 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 THRBP10828 461 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 AZGP1P25311 298 aaKnown RBP15.16■□□□□ 0.02
PTPRF-206ENST00000429895 CDKN2BP42772 138 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 CCR3P51677 355 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 BICRALQ6AI39 1079 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 AAGABQ6PD74 315 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 ZNF615Q8N8J6 731 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 TMEM145Q8NBT3 493 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 DBF4BQ8NFT6 615 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 CLEC4CQ8WTT0 213 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 CCDC115Q96NT0 180 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 ADAM7Q9H2U9 754 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 TRPV5Q9NQA5 729 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 FZD10Q9ULW2 581 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.16■□□□□ 0.02
PTPRF-206ENST00000429895 KERAO60938 352 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 C8GP07360 202 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 ARL2P36404 184 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 AKAP14Q86UN6 197 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 MREGQ8N565 214 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 SCAMP5Q8TAC9 235 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 ADAP2Q9NPF8 381 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 TMEM150CB9EJG8 249 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 AMZ2Q86W34 360 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 MMAAQ8IVH4 418 aaKnown RBP15.16■□□□□ 0.02
PTPRF-206ENST00000429895 GIPC3Q8TF64 312 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 TNFAIP8L1Q8WVP5 186 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 POP5Q969H6 163 aaKnown RBP15.16■□□□□ 0.02
PTPRF-206ENST00000429895 FAM129BQ96TA1 746 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 BRD7Q9NPI1 651 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 CALML5Q9NZT1 146 aa15.16■□□□□ 0.02
PTPRF-206ENST00000429895 GATBO75879 557 aaKnown RBP15.15■□□□□ 0.02
PTPRF-206ENST00000429895 OGNP20774 298 aaKnown RBP15.15■□□□□ 0.02
PTPRF-206ENST00000429895 SLC7A1P30825 629 aa15.15■□□□□ 0.02
PTPRF-206ENST00000429895 BLKP51451 505 aa15.15■□□□□ 0.02
PTPRF-206ENST00000429895 AKR1D1P51857 326 aa15.15■□□□□ 0.02
PTPRF-206ENST00000429895 DNAJC5Q9H3Z4 198 aa15.15■□□□□ 0.02
PTPRF-206ENST00000429895 INTS10Q9NVR2 710 aaKnown RBP15.15■□□□□ 0.02
PTPRF-206ENST00000429895 TVP23BQ9NYZ1 205 aa15.15■□□□□ 0.02
PTPRF-206ENST00000429895 ALPPP05187 535 aa15.15■□□□□ 0.02
PTPRF-206ENST00000429895 ACVR2AP27037 513 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms