RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CLIP3Q96DZ5 547 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 DPH2Q9BQC3 489 aaPredicted RBP14.47□□□□□ -0.09
MSH5-208ENST00000429846 NLNQ9BYT8 704 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 PITPNM3Q9BZ71 974 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 CHST8Q9H2A9 424 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 OR52A5Q9H2C5 316 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 TFB2MQ9H5Q4 396 aaKnown RBP14.47□□□□□ -0.09
MSH5-208ENST00000429846 MVB12BQ9H7P6 319 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 ZDHHC3Q9NYG2 299 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 G3BP2Q9UN86 482 aaKnown RBP14.47□□□□□ -0.09
MSH5-208ENST00000429846 USP9XQ93008 2570 aaPredicted RBP14.47□□□□□ -0.09
MSH5-208ENST00000429846 MED13Q9UHV7 2174 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 SPTBP11277 2137 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 RP1L1Q8IWN7 2480 aaPredicted RBP14.47□□□□□ -0.09
MSH5-208ENST00000429846 TRBV5-4A0A0C4DH59 114 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 ARGFXA6NJG6 315 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 SLC9B1P1A6NJY1 282 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 C2orf74A8MZ97 194 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 TMEM150CB9EJG8 249 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 LDB2O43679 373 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 IPO7O95373 1038 aaKnown RBP14.46□□□□□ -0.09
MSH5-208ENST00000429846 CYP2A7P20853 494 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 ACRV1P26436 265 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 PRDX3P30048 256 aaKnown RBP14.46□□□□□ -0.09
MSH5-208ENST00000429846 MC4RP32245 332 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 RORAP35398 523 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 PREPP48147 710 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 ARCN1P48444 511 aaKnown RBP14.46□□□□□ -0.09
MSH5-208ENST00000429846 RWDD2BP57060 319 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 OLIG2Q13516 323 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 ZNF658BQ4V348 819 aaPredicted RBP14.46□□□□□ -0.09
MSH5-208ENST00000429846 PLEKHS1Q5SXH7 462 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 CPZQ66K79 652 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 DENND5AQ6IQ26 1287 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 HPS6Q86YV9 775 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 ENDOVQ8N8Q3 282 aaKnown RBP14.46□□□□□ -0.09
MSH5-208ENST00000429846 GALNT11Q8NCW6 608 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 CCDC110Q8TBZ0 833 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 PPM1MQ96MI6 270 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 FERD3LQ96RJ6 166 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 TRIM5Q9C035 493 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 ACTR5Q9H9F9 607 aaPredicted RBP14.46□□□□□ -0.09
MSH5-208ENST00000429846 SERTAD3Q9UJW9 196 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 TCFL5Q9UL49 500 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 TFR2Q9UP52 801 aa14.46□□□□□ -0.09
MSH5-208ENST00000429846 SEC16AO15027 2179 aa14.46□□□□□ -0.1
MSH5-208ENST00000429846 SPTAN1Q13813 2472 aaKnown RBP14.46□□□□□ -0.1
MSH5-208ENST00000429846 TTLL8A6PVC2 850 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 BTNL10A8MVZ5 291 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 QSOX1O00391 747 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 BTN3A1O00481 513 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 VPS4BO75351 444 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 CEACAM4O75871 244 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 TMEM63AO94886 807 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 HBQ1P09105 142 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 PTGIRP43119 386 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 TMPRSS15P98073 1019 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 ZNF789Q5FWF6 425 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 FBXO38Q6PIJ6 1188 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 SYTL1Q8IYJ3 562 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 TMEM102Q8N9M5 508 aaPredicted RBP14.45□□□□□ -0.1
MSH5-208ENST00000429846 OR52E1Q8NGJ3 308 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 DNAJC1Q96KC8 554 aaKnown RBP14.45□□□□□ -0.1
MSH5-208ENST00000429846 PCMTD2Q9NV79 361 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 VPS4AQ9UN37 437 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 ZNF451Q9Y4E5 1061 aa14.45□□□□□ -0.1
MSH5-208ENST00000429846 SPENQ96T58 3664 aaKnown RBP14.45□□□□□ -0.1
MSH5-208ENST00000429846 SPTBN1Q01082 2364 aaKnown RBP14.45□□□□□ -0.1
MSH5-208ENST00000429846 GOLGA6L9A6NEM1 432 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 E7EQ34 232 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 BTN3A3O00478 584 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 DPM1O60762 260 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 AP2A2O94973 939 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 ST6GAL1P15907 406 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 CCL11P51671 97 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 VAV2P52735 878 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 RRADP55042 308 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 NAP1L1P55209 391 aaKnown RBP14.44□□□□□ -0.1
MSH5-208ENST00000429846 ITGA1P56199 1179 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 CHAF1BQ13112 559 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 P3H1Q32P28 736 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 ZRANB3Q5FWF4 1079 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 PRAMEF17Q5VTA0 474 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 KCTD11Q693B1 232 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 FAM198BQ6UWH4 519 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 ARHGEF18Q6ZSZ5 1173 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 MED25Q71SY5 747 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 SERPINA9Q86WD7 417 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 AMIGO1Q86WK6 493 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 TTC13Q8NBP0 860 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 OR1L3Q8NH93 324 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 CPT1CQ8TCG5 803 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 TFGQ92734 400 aaPredicted RBP14.44□□□□□ -0.1
MSH5-208ENST00000429846 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.44□□□□□ -0.1
MSH5-208ENST00000429846 PSMG3-AS1Q96PY0 264 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 TRAPPC9Q96Q05 1148 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 PANX2Q96RD6 677 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 C17orf62Q9BQA9 187 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 DHRS4Q9BTZ2 278 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 SLC7A5P2Q9GIP4 190 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms