RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 TK2O00142 265 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 KHNYNO15037 678 aaKnown RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 YKT6O15498 198 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 PRPF4O43172 522 aaKnown RBP eCLIP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 AQP9O43315 295 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 TYROBPO43914 113 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 KERAO60938 352 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 SUPT3HO75486 399 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 PIAS2O75928 621 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 ZWINTO95229 277 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 CER1O95813 267 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 CATP04040 527 aaKnown RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 S100BP04271 92 aaPredicted RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 RPN2P04844 631 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 C8GP07360 202 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 RETP07949 1114 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 ANXA6P08133 673 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 SYPP08247 313 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 RBP1P09455 135 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC2A4P14672 509 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 CYP2A7P20853 494 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 MAP4P27816 1152 aaKnown RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 EPHA8P29322 1005 aaPredicted RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 OAS2P29728 719 aaKnown RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 RPA3P35244 121 aaPredicted RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 MAPK9P45984 424 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 BDKRB1P46663 353 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 CCT8P50990 548 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 PPP2R2AP63151 447 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 ACAP2Q15057 778 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 OR4D1Q15615 310 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 TSNQ15631 228 aaKnown RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 HLA-BQ31612 363 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 UAP1L1Q3KQV9 507 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 TECRLQ5HYJ1 363 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 HHATQ5VTY9 493 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC23A3Q6PIS1 610 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 LVRNQ6Q4G3 990 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 XKR5Q6UX68 686 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 UNC5DQ6UXZ4 953 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 SH2D5Q6ZV89 423 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 UBE2R2Q712K3 238 aaPredicted RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 NRROSQ86YC3 692 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 GPSM1Q86YR5 675 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 DCUN1D3Q8IWE4 304 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 TRIM48Q8IWZ4 208 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 ARMC2Q8NEN0 867 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 TCP10LQ8TDR4 215 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 GPBAR1Q8TDU6 330 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 KIAA1191Q96A73 305 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 PTERQ96BW5 349 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 CXorf40BQ96DE9 158 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 PDLIM5Q96HC4 596 aaKnown RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 C12orf66Q96MD2 445 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 GPR78Q96P69 363 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 FAM111AQ96PZ2 611 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 PAIP2Q9BPZ3 127 aaKnown RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 MRPL57Q9BQC6 102 aaKnown RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 HGH1Q9BTY7 390 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 TRIM54Q9BYV2 358 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 ZDHHC5Q9C0B5 715 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 OR52A5Q9H2C5 316 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 MRPL46Q9H2W6 279 aaKnown RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 C12orf65Q9H3J6 166 aaKnown RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 TFB2MQ9H5Q4 396 aaKnown RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 MLXIPLQ9NP71 852 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 UCKL1Q9NWZ5 548 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 UTP6Q9NYH9 597 aaKnown RBP7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 TMEM216Q9P0N5 145 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC17A7Q9P2U7 560 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 NCDNQ9UBB6 729 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 CIDEBQ9UHD4 219 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 MID2Q9UJV3 735 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 ADAMTS6Q9UKP5 1117 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 IKZF3Q9UKT9 509 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 EMCNQ9ULC0 261 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 GRID1Q9ULK0 1009 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 WDR37Q9Y2I8 494 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 PLLPQ9Y342 182 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 ST14Q9Y5Y6 855 aa7.73□□□□□ -1.17
HMGA1P4-201ENST00000428643 A0A1B0GTQ1 180 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 A6NCN8 305 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 SYCE1LA8MT33 242 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 ARHGEF33A8MVX0 844 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 LMO7DNF2Z398 122 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 UBXN8O00124 270 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 ARHGAP33O14559 1287 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 TM9SF1O15321 606 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC16A5O15375 505 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 DFNA5O60443 496 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 PLIN3O60664 434 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 SMIM24O75264 130 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 MATN4O95460 622 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 EML2O95834 649 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 PROCP04070 461 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 HIST1H2AGP0C0S8 130 aaPredicted RBP7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 MYL2P10916 166 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 MTHFD1P11586 935 aaKnown RBP7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 F3P13726 295 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 GFAPP14136 432 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms