RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 HERV-K104P61576 105 aa3.83□□□□□ -1.8
LINC01040-201ENST00000425048 ANKRD42Q8N9B4 389 aa3.83□□□□□ -1.8
LINC01040-201ENST00000425048 ZNF582Q96NG8 517 aaPredicted RBP3.83□□□□□ -1.8
LINC01040-201ENST00000425048 PAIP1Q9H074 479 aaKnown RBP3.83□□□□□ -1.8
LINC01040-201ENST00000425048 PANK4Q9NVE7 773 aa3.83□□□□□ -1.8
LINC01040-201ENST00000425048 ARHGAP26Q9UNA1 814 aa3.83□□□□□ -1.8
LINC01040-201ENST00000425048 PPP1R3CQ9UQK1 317 aa3.83□□□□□ -1.8
LINC01040-201ENST00000425048 DCAF1Q9Y4B6 1507 aa3.83□□□□□ -1.8
LINC01040-201ENST00000425048 NPIPB15A6NHN6 443 aaPredicted RBP3.82□□□□□ -1.8
LINC01040-201ENST00000425048 SPARCP09486 303 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 MMP12P39900 470 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 GALCP54803 685 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 GOLGA8DPQ0D2H9 430 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 NIPAL4Q0D2K0 466 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 Q6ZRP5 223 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 NOL8Q76FK4 1167 aaKnown RBP3.82□□□□□ -1.8
LINC01040-201ENST00000425048 MAPKAPK5-AS1Q8N8E1 139 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 ZNF519Q8TB69 540 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 AZIN2Q96A70 460 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 GAL3ST4Q96RP7 486 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 SLC22A12Q96S37 553 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 POLR1BQ9H9Y6 1135 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 SLC13A4Q9UKG4 626 aa3.82□□□□□ -1.8
LINC01040-201ENST00000425048 SPIN1Q9Y657 262 aaPredicted RBP3.82□□□□□ -1.8
LINC01040-201ENST00000425048 SOS1Q07889 1333 aaPredicted RBP3.81□□□□□ -1.8
LINC01040-201ENST00000425048 E9PI62 339 aa3.81□□□□□ -1.8
LINC01040-201ENST00000425048 OGG1O15527 345 aa3.81□□□□□ -1.8
LINC01040-201ENST00000425048 C22orf31O95567 290 aa3.81□□□□□ -1.8
LINC01040-201ENST00000425048 CA4P22748 312 aa3.81□□□□□ -1.8
LINC01040-201ENST00000425048 CCT5P48643 541 aa3.81□□□□□ -1.8
LINC01040-201ENST00000425048 GLDNQ6ZMI3 551 aaPredicted RBP3.81□□□□□ -1.8
LINC01040-201ENST00000425048 TBC1D1Q86TI0 1168 aaPredicted RBP3.81□□□□□ -1.8
LINC01040-201ENST00000425048 CPSF7Q8N684 471 aaKnown RBP3.81□□□□□ -1.8
LINC01040-201ENST00000425048 POM121L12Q8N7R1 296 aa3.81□□□□□ -1.8
LINC01040-201ENST00000425048 Q8NBF4 154 aa3.81□□□□□ -1.8
LINC01040-201ENST00000425048 C17orf47Q8NEP4 570 aa3.81□□□□□ -1.8
LINC01040-201ENST00000425048 METTL6Q8TCB7 284 aa3.81□□□□□ -1.8
LINC01040-201ENST00000425048 ZKSCAN4Q969J2 545 aaPredicted RBP3.81□□□□□ -1.8
LINC01040-201ENST00000425048 PPCSQ9HAB8 311 aa3.81□□□□□ -1.8
LINC01040-201ENST00000425048 ZNF195O14628 629 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 MAGEC1O60732 1142 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 PBX3P40426 434 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 OPRL1P41146 370 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 PAX9P55771 341 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 PLA2G7Q13093 441 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 CALCOCO2Q13137 446 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 HIGD2BQ4VC39 106 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 CYP20A1Q6UW02 462 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 LINGO4Q6UY18 593 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 WDFY2Q96P53 400 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 PUS3Q9BZE2 481 aaKnown RBP3.8□□□□□ -1.8
LINC01040-201ENST00000425048 NPAP1Q9NZP6 1156 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 PNMA2Q9UL42 364 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 ANGPTL3Q9Y5C1 460 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 DGKBQ9Y6T7 804 aa3.8□□□□□ -1.8
LINC01040-201ENST00000425048 RRN3P2A6NIE6 340 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 MPTX1A8MV57 137 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 GH2P01242 217 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 ACTN1P12814 892 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 TRA2BP62995 288 aaKnown RBP3.79□□□□□ -1.8
LINC01040-201ENST00000425048 CYCSP99999 105 aaKnown RBP3.79□□□□□ -1.8
LINC01040-201ENST00000425048 MARCH9Q86YJ5 346 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 ARHGAP12Q8IWW6 846 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 PPFIBP2Q8ND30 876 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 OR10G8Q8NGN5 311 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 CENPTQ96BT3 561 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 CYYR1Q96J86 154 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 PRICKLE1Q96MT3 831 aaPredicted RBP3.79□□□□□ -1.8
LINC01040-201ENST00000425048 SCLT1Q96NL6 688 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 ABHD6Q9BV23 337 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 PDCL3Q9H2J4 239 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 A4GALTQ9NPC4 353 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 SPHK2Q9NRA0 654 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 SDR39U1Q9NRG7 319 aaPredicted RBP3.79□□□□□ -1.8
LINC01040-201ENST00000425048 RRP7BPQ9NSQ0 103 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 ABCA7Q8IZY2 2146 aa3.79□□□□□ -1.8
LINC01040-201ENST00000425048 FAM237BA0A1B0GVD1 139 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 C15orf61A6NNL5 157 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 SCAMP1O15126 338 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 NDUFS4O43181 175 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 DFFBO76075 338 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 TMEM11P17152 192 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 CYP2A7P20853 494 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 TUBP50607 506 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 TMEM50BP56557 158 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 LY6DQ14210 128 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 C15orf32Q32M92 178 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 MOGAT2Q3SYC2 334 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 ACSM2BQ68CK6 577 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 SEL1L3Q68CR1 1132 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 ACAD10Q6JQN1 1059 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 HJURPQ8NCD3 748 aaPredicted RBP3.78□□□□□ -1.8
LINC01040-201ENST00000425048 MTERF3Q96E29 417 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 HGH1Q9BTY7 390 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 HHATLQ9HCP6 504 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 RRN3Q9NYV6 651 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 CLIP2Q9UDT6 1046 aa3.78□□□□□ -1.8
LINC01040-201ENST00000425048 ATRXP46100 2492 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms