RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 KLK8O60259 260 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 BPGMP07738 259 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 SLC35G4P0C7Q5 338 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 TPBGLP0DKB5 382 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 MTHFD2P13995 350 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 ATP1A2P50993 1020 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 HNRNPKP61978 463 aaKnown RBP eCLIP13.92□□□□□ -0.18
SF3B1-204ENST00000414963 CDKL1Q00532 357 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 ABRQ12979 859 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 KIF19Q2TAC6 998 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 UAP1L1Q3KQV9 507 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 ZNF542PQ5EBM4 170 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 HHATQ5VTY9 493 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 ZC3H14Q6PJT7 736 aaKnown RBP13.92□□□□□ -0.18
SF3B1-204ENST00000414963 CCDC126Q96EE4 140 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 RMDN2Q96LZ7 410 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 FOPNLQ96NB1 174 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 LRFN3Q9BTN0 628 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 LRRC61Q9BV99 259 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 WWP1Q9H0M0 922 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 INTS9Q9NV88 658 aaKnown RBP13.92□□□□□ -0.18
SF3B1-204ENST00000414963 CPSF2Q9P2I0 782 aaKnown RBP13.92□□□□□ -0.18
SF3B1-204ENST00000414963 TBC1D29Q9UFV1 150 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 APOBEC3BQ9UH17 382 aaKnown RBP13.92□□□□□ -0.18
SF3B1-204ENST00000414963 ADAMTS6Q9UKP5 1117 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 RNF112Q9ULX5 631 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 PCDHGA5Q9Y5G8 931 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 TNRC6BQ9UPQ9 1833 aaKnown RBP13.92□□□□□ -0.18
SF3B1-204ENST00000414963 IFRD1O00458 451 aaPredicted RBP13.91□□□□□ -0.18
SF3B1-204ENST00000414963 DFNA5O60443 496 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 DLX3O60479 287 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 EPN2O95208 641 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 C1orf105O95561 183 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 CATP04040 527 aaKnown RBP13.91□□□□□ -0.18
SF3B1-204ENST00000414963 MYL2P10916 166 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 CTSEP14091 401 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 TAC1P20366 129 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 ATP5F1P24539 256 aaPredicted RBP13.91□□□□□ -0.18
SF3B1-204ENST00000414963 AK4P27144 223 aaPredicted RBP13.91□□□□□ -0.18
SF3B1-204ENST00000414963 PRKAA2P54646 552 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 AP1S2P56377 157 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 DNAJB13P59910 316 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 NFKB2Q00653 900 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 IL9RQ01113 521 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 PCLAFQ15004 111 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 ELOCQ15369 112 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 TGFBIQ15582 683 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 PHKG1Q16816 387 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 SLC23A3Q6PIS1 610 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 UBE2R2Q712K3 238 aaPredicted RBP13.91□□□□□ -0.18
SF3B1-204ENST00000414963 CCDC63Q8NA47 563 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 SPDYE1Q8NFV5 336 aaPredicted RBP13.91□□□□□ -0.18
SF3B1-204ENST00000414963 CCL4L1Q8NHW4 92 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 MCOLN3Q8TDD5 553 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 SKA2Q8WVK7 121 aaPredicted RBP13.91□□□□□ -0.18
SF3B1-204ENST00000414963 TFGQ92734 400 aaPredicted RBP13.91□□□□□ -0.18
SF3B1-204ENST00000414963 TRIM54Q9BYV2 358 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 OSGEPL1Q9H4B0 414 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 CAPN10Q9HC96 672 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 OXSMQ9NWU1 459 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 NUDT4Q9NZJ9 180 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 SIRPGQ9P1W8 387 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 SPASTQ9UBP0 616 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 PDE10AQ9Y233 779 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 WDR37Q9Y2I8 494 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 SNX11Q9Y5W9 270 aa13.91□□□□□ -0.18
SF3B1-204ENST00000414963 ATXN2Q99700 1313 aaKnown RBP13.9□□□□□ -0.18
SF3B1-204ENST00000414963 OR5K4A6NMS3 321 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 ARHGEF33A8MVX0 844 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 SCAMP1O15126 338 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 SMIM24O75264 130 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 RPN2P04844 631 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 CYP2A7P20853 494 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 RPL10P27635 214 aaKnown RBP13.9□□□□□ -0.18
SF3B1-204ENST00000414963 ALDH3A1P30838 453 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 MDH1P40925 334 aaKnown RBP13.9□□□□□ -0.18
SF3B1-204ENST00000414963 ACTR1BP42025 376 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 RPIAP49247 311 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 ACTR1AP61163 376 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 IRX4P78413 519 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 CLCA4Q14CN2 919 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 ZNF423Q2M1K9 1284 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 PRRT3Q5FWE3 981 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 PRR23BQ6ZRT6 265 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 SLC22A9Q8IVM8 553 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 TBC1D21Q8IYX1 336 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 PDPRQ8NCN5 879 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 OR6Y1Q8NGX8 325 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 MGARPQ8TDB4 240 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 INSM2Q96T92 566 aaPredicted RBP13.9□□□□□ -0.18
SF3B1-204ENST00000414963 ELF4Q99607 663 aaPredicted RBP13.9□□□□□ -0.18
SF3B1-204ENST00000414963 MVB12BQ9H7P6 319 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 MLXIPLQ9NP71 852 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 PRDM8Q9NQV8 689 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 TAAR2Q9P1P5 351 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 TSR3Q9UJK0 312 aaKnown RBP13.9□□□□□ -0.18
SF3B1-204ENST00000414963 SLC6A14Q9UN76 642 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 PSMD13Q9UNM6 376 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 HEBP2Q9Y5Z4 205 aa13.9□□□□□ -0.18
SF3B1-204ENST00000414963 CSNK1G3Q9Y6M4 447 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms