RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PFN3P60673 137 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 SRSF5Q13243 272 aaKnown RBP15.22■□□□□ 0.03
SHMT2-202ENST00000414700 USP39Q53GS9 565 aaKnown RBP15.22■□□□□ 0.03
SHMT2-202ENST00000414700 XKR5Q6UX68 686 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 ISCA2Q86U28 154 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 C1orf210Q8IVY1 113 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 RBM12BQ8IXT5 1001 aaKnown RBP15.22■□□□□ 0.03
SHMT2-202ENST00000414700 TMEFF1Q8IYR6 380 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 PPFIBP2Q8ND30 876 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 ELMO1Q92556 727 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 LINGO1Q96FE5 620 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 NR1H4Q96RI1 486 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-202ENST00000414700 ZCCHC2Q9C0B9 1178 aaKnown RBP15.22■□□□□ 0.03
SHMT2-202ENST00000414700 NMRAL1Q9HBL8 299 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 FGF22Q9HCT0 170 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 XPR1Q9UBH6 696 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 EIF2B4Q9UI10 523 aaKnown RBP15.22■□□□□ 0.03
SHMT2-202ENST00000414700 CDYLQ9Y232 598 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 ZFC3H1O60293 1989 aaKnown RBP15.22■□□□□ 0.03
SHMT2-202ENST00000414700 SPEGQ15772 3267 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 WDR91A4D1P6 747 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 METTL12A8MUP2 240 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 LAMTOR5O43504 91 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 NUAK1O60285 661 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 COL6A2P12110 1019 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 TFEBP19484 476 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 AKT2P31751 481 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 IL2P60568 153 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 INSCQ1MX18 579 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 FAM83EQ2M2I3 478 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 LRRC8EQ6NSJ5 796 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 UGT3A1Q6NUS8 523 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 LAYNQ6UX15 382 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 OR13H1Q8NG92 308 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 SPACA7Q96KW9 195 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 HSPA12BQ96MM6 686 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 SLC6A18Q96N87 628 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 ALG9Q9H6U8 611 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 SYTL2Q9HCH5 934 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 LATS2Q9NRM7 1088 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 SLC23A2Q9UGH3 650 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 ZFP69BQ9UJL9 534 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 PRAMEF26H0Y7S4 382 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 CDC7O00311 574 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 MAP3K7O43318 606 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 FTH1P02794 183 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 DHRS4L1P0CG22 281 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 SLC26A3P40879 764 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 PREPP48147 710 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 GTF2H3Q13889 308 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 OR4D1Q15615 310 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 ZNF658BQ4V348 819 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-202ENST00000414700 BCL7AQ4VC05 210 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 AGAP9Q5VTM2 703 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 SLC22A18ASQ8N1D0 253 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 SCYL1Q96KG9 808 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 CCM2Q9BSQ5 444 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 EPHX3Q9H6B9 360 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 SLC17A4Q9Y2C5 497 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 LRP4O75096 1905 aa15.21■□□□□ 0.03
SHMT2-202ENST00000414700 TARM1B6A8C7 271 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 CACNB4O00305 520 aaPredicted RBP15.21■□□□□ 0.02
SHMT2-202ENST00000414700 MAGEC1O60732 1142 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 GPR37L1O60883 481 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 POP7O75817 140 aaKnown RBP15.21■□□□□ 0.02
SHMT2-202ENST00000414700 KRT36O76013 467 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 PSMG1O95456 288 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 PDHA2P29803 388 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 HOXA6P31267 233 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 CSTF1Q05048 431 aaKnown RBP15.21■□□□□ 0.02
SHMT2-202ENST00000414700 GBX1Q14549 363 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 TSNQ15631 228 aaKnown RBP15.21■□□□□ 0.02
SHMT2-202ENST00000414700 SEPT7Q16181 437 aaKnown RBP15.21■□□□□ 0.02
SHMT2-202ENST00000414700 PDK4Q16654 411 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 TECRLQ5HYJ1 363 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 KYAT3Q6YP21 454 aaKnown RBP15.21■□□□□ 0.02
SHMT2-202ENST00000414700 Q6ZSR6 202 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 ARMCX6Q7L4S7 300 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 ABI3BPQ7Z7G0 1075 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 PDXPQ96GD0 296 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 MIPEPQ99797 713 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 DERL2Q9GZP9 239 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 ZNHIT2Q9UHR6 403 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 MOSPD1Q9UJG1 213 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 GPR34Q9UPC5 381 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 DNAJC16Q9Y2G8 782 aa15.21■□□□□ 0.02
SHMT2-202ENST00000414700 NPEPPSL1A6NEC2 478 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 NEMP2A6NFY4 417 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 KCNA4P22459 653 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 SH3BGRP55822 239 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-202ENST00000414700 NFE2L1Q14494 772 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 PCLAFQ15004 111 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 TCEA2Q15560 299 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 CNPY1Q3B7I2 92 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 HHATQ5VTY9 493 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 CYHR1Q6ZMK1 362 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 LCA5Q86VQ0 697 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 NKAPQ8N5F7 415 aaKnown RBP15.2■□□□□ 0.02
SHMT2-202ENST00000414700 CADM4Q8NFZ8 388 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 TSNARE1Q96NA8 513 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms