RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SOCS5O75159 536 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 FABP3P05413 133 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 SLC26A3P40879 764 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 KHKP50053 298 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 LY6G5CQ5SRR4 150 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 MAP4K5Q9Y4K4 846 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 OLR1P78380 273 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 LIPEQ05469 1076 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 PDK3Q15120 406 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 KLHL12Q53G59 568 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 LRRC73Q5JTD7 316 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 RPTNQ6XPR3 784 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 EEF1AKMT1Q8WVE0 214 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 ZNF641Q96N77 438 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-202ENST00000413872 TAPBPLQ9BX59 468 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 KCNN2Q9H2S1 579 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 LIN7AO14910 233 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-202ENST00000413872 UGT1A9O60656 530 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 UGT1A6P19224 532 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 UGT1A1P22309 533 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 UGT1A4P22310 534 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 RCVRNP35243 200 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 UGT1A3P35503 534 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 FOXM1Q08050 763 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 PITRM1Q5JRX3 1037 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 WDR45BQ5MNZ6 344 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 PRAMEF14Q5SWL7 426 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 PRAMEF13Q5VWM6 474 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 ARMC3Q5W041 872 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 ABHD13Q7L211 337 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 CAMKVQ8NCB2 501 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 VANGL1Q8TAA9 524 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-202ENST00000413872 PLEKHO2Q8TD55 490 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 UGT1A7Q9HAW7 530 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 UGT1A10Q9HAW8 530 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 UGT1A8Q9HAW9 530 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 ATXN2Q99700 1313 aaKnown RBP16.99■□□□□ 0.31
PHRF1-202ENST00000413872 LOC100506127A0A0U1RQW1 187 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 PRORSD1PA6NEY8 169 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 DUXAA6NLW8 204 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 KMOO15229 486 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 PAPSS2O95340 614 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-202ENST00000413872 ALPIP09923 528 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 CD247P20963 164 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 ZBTB6Q15916 424 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 PAQR3Q6TCH7 311 aa16.99■□□□□ 0.31
PHRF1-202ENST00000413872 MRM3Q9HC36 420 aaKnown RBP16.99■□□□□ 0.31
PHRF1-202ENST00000413872 IGKV6-21A0A0C4DH24 114 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 GSC2O15499 205 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 SAGP10523 405 aaPredicted RBP16.98■□□□□ 0.31
PHRF1-202ENST00000413872 SLC13A2Q13183 592 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 KRT77Q7Z794 578 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 ZNF781Q8N8C0 355 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 SLC35G5Q96KT7 338 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 RBM4BQ9BQ04 359 aaKnown RBP16.98■□□□□ 0.31
PHRF1-202ENST00000413872 DCUN1D5Q9BTE7 237 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 RBM4Q9BWF3 364 aaKnown RBP16.98■□□□□ 0.31
PHRF1-202ENST00000413872 PHRF1Q9P1Y6 1649 aaKnown RBP16.98■□□□□ 0.31
PHRF1-202ENST00000413872 LATS1O95835 1130 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 CYBAP13498 195 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 CSF2RAP15509 400 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 ATP5A1P25705 553 aaKnown RBP16.98■□□□□ 0.31
PHRF1-202ENST00000413872 KCNJ11Q14654 390 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 EIPR1Q53HC9 387 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 ZNF280BQ86YH2 543 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 DCBLD1Q8N8Z6 715 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 DENND1AQ8TEH3 1009 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 CRISPLD1Q9H336 500 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 SLC32A1Q9H598 525 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 FADS2P1A8MWK0 482 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 IL12BP29460 328 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 AQP1P29972 269 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 HOXD13P35453 343 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 MYBPC1Q00872 1141 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 JAZF1Q86VZ6 243 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 IZUMO1Q8IYV9 350 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 ALG2Q9H553 416 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 CIDEBQ9UHD4 219 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 NUP188Q5SRE5 1749 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 IGKV6D-21A0A0A0MT36 114 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 HAS3O00219 553 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 CFHP08603 1231 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 PIM1P11309 404 aaPredicted RBP16.98■□□□□ 0.31
PHRF1-202ENST00000413872 NOVP48745 357 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 ERVK-8P63133 956 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 TCEAL1Q15170 157 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 REP15Q6BDI9 236 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 SLC13A3Q8WWT9 602 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 RAB7BQ96AH8 199 aa16.98■□□□□ 0.31
PHRF1-202ENST00000413872 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.98■□□□□ 0.31
PHRF1-202ENST00000413872 NIPSNAP2O75323 286 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 GPR32O75388 356 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 LDOC1O95751 146 aaPredicted RBP16.97■□□□□ 0.31
PHRF1-202ENST00000413872 PLA2G16P53816 162 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 SUZ12Q15022 739 aaKnown RBP16.97■□□□□ 0.31
PHRF1-202ENST00000413872 DCST1Q5T197 706 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 PNPT1Q8TCS8 783 aaKnown RBP16.97■□□□□ 0.31
PHRF1-202ENST00000413872 AP3S1Q92572 193 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 SLC29A3Q9BZD2 475 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 IL1RAPQ9NPH3 570 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms