RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CYP2A7P20853 494 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 SERPINB3P29508 390 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 SH3BP2P78314 561 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 ZNF658BQ4V348 819 aaPredicted RBP12.18□□□□□ -0.46
CHMP3-204ENST00000409727 MTDHQ86UE4 582 aaKnown RBP12.18□□□□□ -0.46
CHMP3-204ENST00000409727 UBALD2Q8IYN6 164 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 SLC22A15Q8IZD6 547 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 DEFB119Q8N690 84 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 FITM2Q8N6M3 262 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 PJA1Q8NG27 643 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 OR2L2Q8NH16 312 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 MAPK15Q8TD08 544 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 SNX19Q92543 992 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 RHBDF1Q96CC6 855 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 SLC12A9Q9BXP2 914 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 EBF2Q9HAK2 575 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 CD320Q9NPF0 282 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 PTBP2Q9UKA9 531 aaKnown RBP12.18□□□□□ -0.46
CHMP3-204ENST00000409727 TMCO1Q9UM00 188 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 PSMD13Q9UNM6 376 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 MGAT4DA6NG13 374 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 ARHGEF33A8MVX0 844 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 MATN2O00339 956 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 ZNF195O14628 629 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 LIN7AO14910 233 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 MATN4O95460 622 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 ANXA5P08758 320 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 GSTM1P09488 218 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 HNRNPA2B1P22626 353 aaKnown RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 RPL10P27635 214 aaKnown RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 MAP4P27816 1152 aaKnown RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 TEAD1P28347 426 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 IDH3AP50213 366 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 GSTM4Q03013 218 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 MTAPQ13126 283 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 CCSMST1Q4G0I0 132 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 SLC9B1Q4ZJI4 515 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 SULT1C3Q6IMI6 304 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 XKR5Q6UX68 686 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 NEK10Q6ZWH5 1172 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 HM13Q8TCT9 377 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 MCOLN3Q8TDD5 553 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 ZNF483Q8TF39 744 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 ERP27Q96DN0 273 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 LINC00615Q96LM1 132 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 FOPNLQ96NB1 174 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 CDK15Q96Q40 435 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 LRRC37BQ96QE4 947 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 KCNA7Q96RP8 456 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 PLCD4Q9BRC7 762 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 TMEM79Q9BSE2 394 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 WWP1Q9H0M0 922 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 OSGEPL1Q9H4B0 414 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 ZBTB26Q9HCK0 441 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 SUFUQ9UMX1 484 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 GPSM3Q9Y4H4 160 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 VCANP13611 3396 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 ANKRD65E5RJM6 399 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 GFYI3L273 518 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 KMOO15229 486 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 CRCPO75575 148 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 DCTN3O75935 186 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 KIAA0754O94854 1291 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 IGHV4-34P06331 123 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 CEACAM5P06731 702 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 PRDX3P30048 256 aaKnown RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 CD6P30203 668 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 GNPDA1P46926 289 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 FOXA1P55317 472 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 HNRNPH2P55795 449 aaKnown RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 DMTNQ08495 405 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 LCP2Q13094 533 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 SP140Q13342 867 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 ENPP7Q6UWV6 458 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 CCDC121Q6ZUS5 278 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 RD3Q7Z3Z2 195 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 GOLGA7Q7Z5G4 137 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 SPATS2Q86XZ4 545 aaKnown RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 TEX9Q8N6V9 391 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 PYCR2Q96C36 320 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 BIRC7Q96CA5 298 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 PRR11Q96HE9 360 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 BMFQ96LC9 184 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 NECAB3Q96P71 396 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 SIKE1Q9BRV8 207 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 TRMOQ9BU70 441 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 MYLK2Q9H1R3 596 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 WDR55Q9H6Y2 383 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 NOL11Q9H8H0 719 aaKnown RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 RDH14Q9HBH5 336 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 KLC4Q9NSK0 619 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 HAO1Q9UJM8 370 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 KCNK6Q9Y257 313 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 SIT1Q9Y3P8 196 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 PLEKHM1Q9Y4G2 1056 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 TRAF6Q9Y4K3 522 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 ANGPTL3Q9Y5C1 460 aa12.17□□□□□ -0.46
CHMP3-204ENST00000409727 TNPO3Q9Y5L0 923 aaKnown RBP12.17□□□□□ -0.46
CHMP3-204ENST00000409727 CFAP20Q9Y6A4 193 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms