RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 RASGRF2O14827 1237 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 SH3BP5O60239 455 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 CBFA2T3O75081 653 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 ALDOAP04075 364 aaKnown RBP16.23■□□□□ 0.19
SUMO1-208ENST00000409627 UQCRHP07919 91 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 CRABP2P29373 138 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 PLA2G5P39877 138 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 SLC19A1P41440 591 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 MAGEA12P43365 314 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 MAPK9P45984 424 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 PGGT1BP53609 377 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 MAZP56270 477 aaKnown RBP16.23■□□□□ 0.19
SUMO1-208ENST00000409627 IL2P60568 153 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 UBE2IP63279 158 aaKnown RBP16.23■□□□□ 0.19
SUMO1-208ENST00000409627 NR0B2Q15466 257 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 FBXO38Q6PIJ6 1188 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 TMEM207Q6UWW9 146 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 CCDC91Q7Z6B0 441 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 CMC1Q7Z7K0 106 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 PIP4P1Q86T03 277 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 ARL14Q8N4G2 192 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 NKAPQ8N5F7 415 aaKnown RBP16.23■□□□□ 0.19
SUMO1-208ENST00000409627 TFGQ92734 400 aaPredicted RBP16.23■□□□□ 0.19
SUMO1-208ENST00000409627 CXorf40BQ96DE9 158 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 FAM122AQ96E09 287 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 PDLIM5Q96HC4 596 aaKnown RBP16.23■□□□□ 0.19
SUMO1-208ENST00000409627 STN1Q9H668 368 aaKnown RBP16.23■□□□□ 0.19
SUMO1-208ENST00000409627 GPAMQ9HCL2 828 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 SNX15Q9NRS6 342 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 IMP3Q9NV31 184 aaKnown RBP16.23■□□□□ 0.19
SUMO1-208ENST00000409627 EVA1BQ9NVM1 165 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 CPNE7Q9UBL6 633 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 CTNNAL1Q9UBT7 734 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 U3KQA8 63 aa16.23■□□□□ 0.19
SUMO1-208ENST00000409627 PHGDHO43175 533 aaKnown RBP16.22■□□□□ 0.19
SUMO1-208ENST00000409627 MATN4O95460 622 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 TSPAN12O95859 305 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 CKMT1AP12532 417 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 NDUFS1P28331 727 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 SLCO1A2P46721 670 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 DUSP3P51452 185 aaPredicted RBP16.22■□□□□ 0.19
SUMO1-208ENST00000409627 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.22■□□□□ 0.19
SUMO1-208ENST00000409627 LRIG3Q6UXM1 1119 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 UNC5DQ6UXZ4 953 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 CYHR1Q6ZMK1 362 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 TIFABQ6ZNK6 161 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 SPNS2Q8IVW8 549 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 TRIM48Q8IWZ4 208 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 RBM12BQ8IXT5 1001 aaKnown RBP16.22■□□□□ 0.19
SUMO1-208ENST00000409627 MYO1HQ8N1T3 1032 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 OR6C4Q8NGE1 309 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 MZB1Q8WU39 189 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 EEF1AKMT1Q8WVE0 214 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 SKA2Q8WVK7 121 aaPredicted RBP16.22■□□□□ 0.19
SUMO1-208ENST00000409627 LINGO1Q96FE5 620 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 CNDP2Q96KP4 475 aaKnown RBP16.22■□□□□ 0.19
SUMO1-208ENST00000409627 FOPNLQ96NB1 174 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 MVB12BQ9H7P6 319 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 FTSJ1Q9UET6 329 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 PADI4Q9UM07 663 aa16.22■□□□□ 0.19
SUMO1-208ENST00000409627 CFAP20Q9Y6A4 193 aaKnown RBP16.22■□□□□ 0.19
SUMO1-208ENST00000409627 RIF1Q5UIP0 2472 aaKnown RBP16.22■□□□□ 0.19
SUMO1-208ENST00000409627 TRBV23OR9-2A0A075B6M9 112 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 EME2A4GXA9 379 aaPredicted RBP16.21■□□□□ 0.19
SUMO1-208ENST00000409627 SMIM23A6NLE4 172 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 NUDT21O43809 227 aaKnown RBP16.21■□□□□ 0.19
SUMO1-208ENST00000409627 LDOC1O95751 146 aaPredicted RBP16.21■□□□□ 0.19
SUMO1-208ENST00000409627 VIPP01282 170 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 RPN2P04844 631 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 SLC35E2BP0CK96 405 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 GLB1P16278 677 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 TYK2P29597 1187 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 SLC26A3P40879 764 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 DAB2P98082 770 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 HHEXQ03014 270 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 ZNF844Q08AG5 666 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 ABRQ12979 859 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 CASP8Q14790 479 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 TAF1BQ53T94 588 aaPredicted RBP16.21■□□□□ 0.19
SUMO1-208ENST00000409627 DUS1LQ6P1R4 473 aaKnown RBP16.21■□□□□ 0.19
SUMO1-208ENST00000409627 RAPH1Q70E73 1250 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 PIWIL4Q7Z3Z4 852 aaKnown RBP16.21■□□□□ 0.19
SUMO1-208ENST00000409627 RASGRP3Q8IV61 690 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 TBC1D21Q8IYX1 336 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 ANKRD49Q8WVL7 239 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 ZFPM2Q8WW38 1151 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 ANKRD7Q92527 254 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 CAMK1GQ96NX5 476 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 ZIM3Q96PE6 472 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 CDC6Q99741 560 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 TRIT1Q9H3H1 467 aaKnown RBP16.21■□□□□ 0.19
SUMO1-208ENST00000409627 UCK1Q9HA47 277 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 TBK1Q9UHD2 729 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 LGALS13Q9UHV8 139 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 TSR3Q9UJK0 312 aaKnown RBP16.21■□□□□ 0.19
SUMO1-208ENST00000409627 ASF1AQ9Y294 204 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 COLEC10Q9Y6Z7 277 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 WDR87Q6ZQQ6 2873 aa16.21■□□□□ 0.19
SUMO1-208ENST00000409627 GVINP1Q7Z2Y8 2422 aa16.2■□□□□ 0.18
SUMO1-208ENST00000409627 A0A087X1B8 175 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms