RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MED30Q96HR3 178 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 FNBP1Q96RU3 617 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 INTS14Q96SY0 518 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 GPATCH1Q9BRR8 931 aaKnown RBP3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 THUMPD3Q9BV44 507 aaKnown RBP3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 WNT5BQ9H1J7 359 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZWILCHQ9H900 591 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 ACKR4Q9NPB9 350 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 PIH1D3Q9NQM4 214 aaKnown RBP3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 DPP3Q9NY33 737 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 GAGE2DQ9UEU5 116 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 PCDHAC2Q9Y5I4 1007 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 FLT1P17948 1338 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 CGNL1Q0VF96 1302 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 ELOVL7A1L3X0 281 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 OR6C76A6NM76 312 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 LACTBL1A8MY62 500 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 FAM86B1E9PN63 330 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 CLIC2O15247 247 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 SLC7A4O43246 635 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 SMAD6O43541 496 aaKnown RBP3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 TSPAN1O60635 241 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 RAB40ALP0C0E4 278 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 FAM86B2P0C5J1 330 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 TCF4P15884 667 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 JAK1P23458 1154 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 MCCP23508 829 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 USP8P40818 1118 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 UBASH3AP57075 661 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 SEC61A1P61619 476 aaKnown RBP3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 POLR2LP62875 67 aaKnown RBP3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 NR1D2Q14995 579 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZNF585BQ52M93 769 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 TCTE1Q5JU00 501 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 FAM198BQ6UWH4 519 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 DET1Q7L5Y6 550 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 C16orf82Q7Z2V1 217 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 DSG4Q86SJ6 1040 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 LONP2Q86WA8 852 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 OLIG1Q8TAK6 271 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 SETD6Q8TBK2 473 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 NUDCD2Q8WVJ2 157 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 KCNE4Q8WWG9 221 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 SORCS1Q8WY21 1168 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 SLAMF9Q96A28 289 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 MUS81Q96NY9 551 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZNF385AQ96PM9 386 aaKnown RBP3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 RAB3IPQ96QF0 476 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 SEPHS2Q99611 448 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 CPNE1Q99829 537 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 NEURL2Q9BR09 285 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 TMEM204Q9BSN7 226 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 LMF2Q9BU23 707 aaKnown RBP3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 TM6SF1Q9BZW5 370 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 PFDN4Q9NQP4 134 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 CPSF3Q9UKF6 684 aaKnown RBP3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 GTF3C4Q9UKN8 822 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 ABT1Q9ULW3 272 aaKnown RBP3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 KCNK7Q9Y2U2 307 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 TMED3Q9Y3Q3 217 aa3.69□□□□□ -1.82
HMGB1P17-201ENST00000403495 IGHV4OR15-8A0A075B7B6 117 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 A0A0G2JNG1 304 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 PLSCR5A0PG75 271 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 MAGEA13PA6NCF6 341 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 ASPDHA6ND91 283 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 ANKRD66B4E2M5 251 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 PRAC2D3DTV9 90 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 TULP2O00295 520 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 PTGESO14684 152 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 AP5Z1O43299 807 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 SLU7O95391 586 aaKnown RBP3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 AHRP35869 848 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZNF132P52740 706 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 CAPZA1P52907 286 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 RPL24P83731 157 aaKnown RBP3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 BFSP1Q12934 665 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 NFE2L1Q14494 772 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 KIR2DS5Q14953 304 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 IZUMO4Q1ZYL8 232 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 SIRPB2Q5JXA9 342 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 C9orf57Q5W0N0 161 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 PET117Q6UWS5 81 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 KCTD8Q6ZWB6 473 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 NUP54Q7Z3B4 507 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 TLK2Q86UE8 772 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 COMMD2Q86X83 199 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZNF843Q8N446 348 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 TTC30BQ8N4P2 665 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 L3MBTL4Q8NA19 623 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 OR13J1Q8NGT2 312 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 LMO3Q8TAP4 145 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 RNF128Q8TEB7 428 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 DEPDC1BQ8WUY9 529 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 SECTM1Q8WVN6 248 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 ROBO4Q8WZ75 1007 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 EXT2Q93063 718 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 CITED2Q99967 270 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 S1PR5Q9H228 398 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 HIPK2Q9H2X6 1198 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 RAB9BQ9NP90 201 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms