RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TMEM63CQ9P1W3 806 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ITGB1BP2Q9UKP3 347 aa11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DNMT3AQ9Y6K1 912 aaPredicted RBP11.51□□□□□ -0.57
SPTLC1P3-201ENST00000403408 MGAT4DA6NG13 374 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 C9J4A7 227 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 E7EQ34 232 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PMPCBO75439 489 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CYP1A2P05177 515 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ALPPP05187 535 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CCDC172P0C7W6 258 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 MX2P20592 715 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 HMGCLP35914 325 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TSFMP43897 325 aaKnown RBP11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 Q0VFX4 171 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CDSNQ15517 529 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ZNF658BQ4V348 819 aaPredicted RBP11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ARMC6Q6NXE6 501 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 KDELC1Q6UW63 502 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 RBM43Q6ZSC3 357 aaKnown RBP11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ADGRF3Q8IZF5 1079 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 AMER2Q8N7J2 671 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FLVCR1-AS1Q8TAF5 88 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DTX3LQ8TDB6 740 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PPP4R1Q8TF05 950 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TAAR6Q96RI8 345 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 XKR8Q9H6D3 395 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 GLOD4Q9HC38 313 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DHCR7Q9UBM7 475 aaKnown RBP11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 IP6K2Q9UHH9 426 aa11.5□□□□□ -0.57
SPTLC1P3-201ENST00000403408 LOC285095A0A1B0GVY8 99 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 A0A1W2PQJ5 194 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 GSAPA4D1B5 854 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 C3orf70A6NLC5 250 aaPredicted RBP11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 C19orf84I3L1E1 186 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SOCS6O14544 535 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 POLBP06746 335 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SPAM1P38567 509 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FOLR3P41439 243 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SSR1P43307 286 aaKnown RBP11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 GCGRP47871 477 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PER3P56645 1201 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TMPRSS15P98073 1019 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ADCY2Q08462 1091 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 KLHL30Q0D2K2 578 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ART3Q13508 389 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 LDLRAP1Q5SW96 308 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 RHBDD2Q6NTF9 364 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 KCTD6Q8NC69 237 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PHC3Q8NDX5 983 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 OR2L2Q8NH16 312 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DNAJB14Q8TBM8 379 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TRIM11Q96F44 468 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 POM121Q96HA1 1249 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 OLFM3Q96PB7 478 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 IP6K3Q96PC2 410 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 RNF157Q96PX1 679 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DPH2Q9BQC3 489 aaPredicted RBP11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 DEF6Q9H4E7 631 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FANCEQ9HB96 536 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SYTL2Q9HCH5 934 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ATP13A2Q9NQ11 1180 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SERTAD3Q9UJW9 196 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 FBXL4Q9UKA2 621 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PADI2Q9Y2J8 665 aa11.49□□□□□ -0.57
SPTLC1P3-201ENST00000403408 HEATR9A2RTY3 570 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CCDC66A2RUB6 948 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 AGPSO00116 658 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PEX12O00623 359 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 JRKO75564 520 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 IPO13O94829 963 aaKnown RBP11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 KLHL18O94889 574 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TPBGLP0DKB5 382 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 KDELR1P24390 212 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PDHA2P29803 388 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 OTUD4Q01804 1114 aaKnown RBP11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 MYL5Q02045 173 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 AP1B1Q10567 949 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ZNF169Q14929 603 aaPredicted RBP11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SLC14A2Q15849 920 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SIRPB2Q5JXA9 342 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 GDF7Q7Z4P5 450 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CFAP206Q8IYR0 622 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 OR52E1Q8NGJ3 308 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 LCN9Q8WX39 176 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TM9SF4Q92544 642 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 PTERQ96BW5 349 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 CCDC120Q96HB5 630 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 MRGPRX2Q96LB1 330 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TTC25Q96NG3 672 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 TRIM56Q9BRZ2 755 aaKnown RBP11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 XPO4Q9C0E2 1151 aaKnown RBP11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SRMSQ9H3Y6 488 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SMOXQ9NWM0 555 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 SPHK1Q9NYA1 384 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 ACSL5Q9ULC5 683 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 HEY1Q9Y5J3 304 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 KLF2Q9Y5W3 355 aaPredicted RBP11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 HS3ST3B1Q9Y662 390 aa11.48□□□□□ -0.57
SPTLC1P3-201ENST00000403408 A0A087X0T9 212 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms