RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 SERPINB9P50453 376 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 RAB10P61026 200 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 PROX2Q3B8N5 592 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 DUS1LQ6P1R4 473 aaKnown RBP15.57■□□□□ 0.08
HMGA1-204ENST00000401473 PDZD3Q86UT5 571 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 TDRPQ86YL5 185 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 SPATA6LQ8N4H0 392 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 ARL10Q8N8L6 244 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 MZB1Q8WU39 189 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 PSMC3IPQ9P2W1 217 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-204ENST00000401473 CPNE7Q9UBL6 633 aa15.57■□□□□ 0.08
HMGA1-204ENST00000401473 TLDC2A0PJX2 215 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 TRIM49D1C9J1S8 452 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 KRT38O76015 456 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 MATN4O95460 622 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 SNRPAP09012 282 aaKnown RBP15.56■□□□□ 0.08
HMGA1-204ENST00000401473 SLC35E2BP0CK96 405 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 SLC12A2P55011 1212 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 UBE2IP63279 158 aaKnown RBP15.56■□□□□ 0.08
HMGA1-204ENST00000401473 ILF2Q12905 390 aaKnown RBP15.56■□□□□ 0.08
HMGA1-204ENST00000401473 C14orf28Q4W4Y0 310 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 PIWIL4Q7Z3Z4 852 aaKnown RBP15.56■□□□□ 0.08
HMGA1-204ENST00000401473 CFAP61Q8NHU2 1237 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 BAHD1Q8TBE0 780 aaPredicted RBP15.56■□□□□ 0.08
HMGA1-204ENST00000401473 UBXN10Q96LJ8 280 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 ZIM3Q96PE6 472 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 NRTNQ99748 197 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 SLC40A1Q9NP59 571 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 SNX15Q9NRS6 342 aa15.56■□□□□ 0.08
HMGA1-204ENST00000401473 IMP3Q9NV31 184 aaKnown RBP15.56■□□□□ 0.08
HMGA1-204ENST00000401473 CDV3Q9UKY7 258 aaKnown RBP15.56■□□□□ 0.08
HMGA1-204ENST00000401473 ASPMQ8IZT6 3477 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 KIR2DS5A0A0G2JLQ3 304 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 A0A0G2JNG1 304 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 OR5K4A6NMS3 321 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 KIR2DS3K7RE56 304 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 RASGRF2O14827 1237 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 CASC3O15234 703 aaKnown RBP15.55■□□□□ 0.08
HMGA1-204ENST00000401473 RFPL1O75677 317 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 C2P06681 752 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 CNTFP26441 200 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 HALP42357 657 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 IL2P60568 153 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 IFFO1Q0D2I5 559 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 KIR2DS5Q14953 304 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 RASA2Q15283 850 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 TMED2Q15363 201 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 TTLL9Q3SXZ7 439 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 SKA2Q8WVK7 121 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-204ENST00000401473 DLG3Q92796 817 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 ISL2Q96A47 359 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 UNKQ9C0B0 810 aaKnown RBP15.55■□□□□ 0.08
HMGA1-204ENST00000401473 POPDC3Q9HBV1 291 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 IKZF3Q9UKT9 509 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 PADI4Q9UM07 663 aa15.55■□□□□ 0.08
HMGA1-204ENST00000401473 A0A1W2PPM1 405 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 IFRD1O00458 451 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-204ENST00000401473 CDH16O75309 829 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 KRT37O76014 449 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 CBSLP0DN79 551 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 MTHFD1P11586 935 aaKnown RBP15.54■□□□□ 0.08
HMGA1-204ENST00000401473 TYK2P29597 1187 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 CBSP35520 551 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 MAGEA12P43365 314 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 FASLGP48023 281 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 HHEXQ03014 270 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 ZNF844Q08AG5 666 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 DNAJC3Q13217 504 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 PRKG2Q13237 762 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 CASP8Q14790 479 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-204ENST00000401473 GUSBP11Q6P575 273 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 DEFB124Q8NES8 71 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 OR5AR1Q8NGP9 310 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 MAPK15Q8TD08 544 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 ASB11Q8WXH4 323 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 LINGO1Q96FE5 620 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 PDLIM5Q96HC4 596 aaKnown RBP15.54■□□□□ 0.08
HMGA1-204ENST00000401473 TMEM109Q9BVC6 243 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 ROPN1BQ9BZX4 212 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-204ENST00000401473 ROPN1Q9HAT0 212 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-204ENST00000401473 LRIT1Q9P2V4 623 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 ASF1AQ9Y294 204 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 RNF215Q9Y6U7 377 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 COL5A1P20908 1838 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-204ENST00000401473 PCM1Q15154 2024 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 EME2A4GXA9 379 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-204ENST00000401473 KRT87PA6NCN2 255 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 LDOC1O95751 146 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-204ENST00000401473 CCDC166P0CW27 439 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 TPBGLP0DKB5 382 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 CKMT1AP12532 417 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 ENO3P13929 434 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-204ENST00000401473 ATP5DP30049 168 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 IRF9Q00978 393 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 DLG1Q12959 904 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 LGSNQ5TDP6 509 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 TIFABQ6ZNK6 161 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 RAPH1Q70E73 1250 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 ZNF761Q86XN6 746 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms