RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 PIH1D1Q9NWS0 290 aaKnown RBP7.34□□□□□ -1.23
USP16-204ENST00000399976 RAPGEFL1Q9UHV5 662 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 LGALS13Q9UHV8 139 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 TRMT6Q9UJA5 497 aaKnown RBP7.34□□□□□ -1.23
USP16-204ENST00000399976 NFU1Q9UMS0 254 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 BTBD3Q9Y2F9 522 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 ARID1BQ8NFD5 2236 aaPredicted RBP7.34□□□□□ -1.23
USP16-204ENST00000399976 ZNF292O60281 2723 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 IGHV1OR21-1A0A087WYE8 117 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 RASGRF2O14827 1237 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 OPA1O60313 960 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 KRT38O76015 456 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 SLC4A1P02730 911 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 ZNF37AP17032 561 aaPredicted RBP7.34□□□□□ -1.23
USP16-204ENST00000399976 SLC19A1P41440 591 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 ID4P47928 161 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 EMP3P54852 163 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 HHEXQ03014 270 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 DMTNQ08495 405 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 KIR2DS3Q14952 304 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 TSNAXIP1Q2TAA8 658 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 HECTD2Q5U5R9 776 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 TMEM71Q6P5X7 295 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 TRMT10BQ6PF06 316 aaKnown RBP7.34□□□□□ -1.23
USP16-204ENST00000399976 LRIG3Q6UXM1 1119 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 CYHR1Q6ZMK1 362 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 OTOAQ7RTW8 1153 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 CHCHD4Q8N4Q1 142 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 TAB3Q8N5C8 712 aaPredicted RBP7.34□□□□□ -1.23
USP16-204ENST00000399976 OR10G6Q8NH81 332 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 FBF1Q8TES7 1133 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 UBTD2Q8WUN7 234 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 RAD51AP1Q96B01 352 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 PITPNM3Q9BZ71 974 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 NRSN2Q9GZP1 204 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 WWP1Q9H0M0 922 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 SSU72Q9NP77 194 aaKnown RBP7.34□□□□□ -1.23
USP16-204ENST00000399976 SMYD2Q9NRG4 433 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 TXNDC16Q9P2K2 825 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 PCDHGA8Q9Y5G5 932 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 RNF215Q9Y6U7 377 aa7.34□□□□□ -1.23
USP16-204ENST00000399976 FAM95CA0A1B0GW59 222 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 B4E171 279 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 D6RAR5 112 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 E5RI56 91 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 GDF9O60383 454 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 OR1I1O60431 355 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 ERLIN1O75477 346 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 HAUS5O94927 633 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 CCNDBP1O95273 360 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 TSPAN12O95859 305 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 VIPP01282 170 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 CATP04040 527 aaKnown RBP7.33□□□□□ -1.24
USP16-204ENST00000399976 FTH1P19P0C7X4 201 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 ERVK-10P10266 1014 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 GSTM2P28161 218 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 SSTR1P30872 391 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 GGT5P36269 586 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 TSPAN7P41732 249 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 HNMTP50135 292 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 SERPINB8P50452 374 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 KPNA2P52292 529 aaKnown RBP7.33□□□□□ -1.24
USP16-204ENST00000399976 E2F2Q14209 437 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 NFE2L1Q14494 772 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 CLCA4Q14CN2 919 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 RBM44Q6ZP01 1051 aaKnown RBP7.33□□□□□ -1.24
USP16-204ENST00000399976 STRA8Q7Z7C7 330 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 ADAMTSL2Q86TH1 951 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 PLXDC1Q8IUK5 500 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 ANKMY2Q8IV38 441 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 SLITRK4Q8IW52 837 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 DENND6AQ8IWF6 608 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 ATL1Q8WXF7 558 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 KLHL6Q8WZ60 621 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 CXorf40BQ96DE9 158 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 ZPBPQ9BS86 351 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 SARGQ9BW04 601 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 FAM96AQ9H5X1 160 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 UTP6Q9NYH9 597 aaKnown RBP7.33□□□□□ -1.24
USP16-204ENST00000399976 BTRCQ9Y297 605 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 NUP210LQ5VU65 1888 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 OR2AG2A6NM03 316 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 RHPN2P1A8MT19 583 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 PRICKLE3O43900 615 aaPredicted RBP7.33□□□□□ -1.24
USP16-204ENST00000399976 IPO13O94829 963 aaKnown RBP7.33□□□□□ -1.24
USP16-204ENST00000399976 CPNE6O95741 557 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 CELA2BP08218 269 aaPredicted RBP7.33□□□□□ -1.24
USP16-204ENST00000399976 IL2P60568 153 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 RAB10P61026 200 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 DAB2P98082 770 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 RTP5Q14D33 572 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 DEFB133Q30KQ1 61 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 KBTBD12Q3ZCT8 623 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 TEX35Q5T0J7 233 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 YOD1Q5VVQ6 348 aaPredicted RBP7.33□□□□□ -1.24
USP16-204ENST00000399976 CRTC3Q6UUV7 619 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 EFL1Q7Z2Z2 1120 aaKnown RBP7.33□□□□□ -1.24
USP16-204ENST00000399976 SETD7Q8WTS6 366 aaKnown RBP7.33□□□□□ -1.24
USP16-204ENST00000399976 DCAKDQ8WVC6 231 aa7.33□□□□□ -1.24
USP16-204ENST00000399976 TFGQ92734 400 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms