RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ZYG11BQ9C0D3 744 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 RPF2Q9H7B2 306 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CCSER2Q9H7U1 834 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 HSFX1Q9UBD0 423 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 TLR6Q9Y2C9 796 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PRG3Q9Y2Y8 225 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 H3BN98 237 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CYBBP04839 570 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 MAPK1P28482 360 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CDKL1Q00532 357 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 LIPEQ05469 1076 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PFKFB4Q16877 469 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 LYSMD3Q7Z3D4 306 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ELMOD2Q8IZ81 293 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 C2orf15Q8WU43 125 aaKnown RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 BTN2A2Q8WVV5 523 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CDCA5Q96FF9 252 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 MRGPRX2Q96LB1 330 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 SLC29A3Q9BZD2 475 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 NEK6Q9HC98 313 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 SLC52A3Q9NQ40 469 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PRDM5Q9NQX1 630 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 FAM105AQ9NUU6 356 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 MAP10Q9P2G4 905 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 HEMK1Q9Y5R4 338 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 GPR45Q9Y5Y3 372 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PEX16Q9Y5Y5 336 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 NME4O00746 187 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 GPR182O15218 404 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 GLP2RO95838 553 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 UROSP10746 265 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 PRKACBP22694 351 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 HNF4AP41235 474 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 RECQLP46063 649 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-205ENST00000397611 CD83Q01151 205 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 TTLL9Q3SXZ7 439 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 BHLHB9Q6PI77 547 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 SERINC5Q86VE9 423 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF566Q969W8 418 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ASIC4Q96FT7 647 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 TMEM209Q96SK2 561 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 GORASP2Q9H8Y8 452 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF510Q9Y2H8 683 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 TRPV2Q9Y5S1 764 aa5.37□□□□□ -1.55
PTPRD-205ENST00000397611 DRGXA6NNA5 263 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 RPP40O75818 363 aaKnown RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 PGLSO95336 258 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ANGPTL1O95841 491 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 GUCA1CO95843 209 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SERPINA1P01009 418 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 VTNP04004 478 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SMIM10L2AP0DMW4 78 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SMIM10L2BP0DMW5 78 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 KCNA5P22460 613 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 FMO3P31513 532 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 TTPAP49638 278 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ALDH3A2P51648 485 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 PCBP2Q15366 365 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 UNC50Q53HI1 259 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 RBM48Q5RL73 367 aaKnown RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ATAD3BQ5T9A4 648 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 GLYATQ6IB77 296 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 MZT2AQ6P582 158 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SLC15A4Q8N697 577 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 METTL25Q8N6Q8 603 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 WDR36Q8NI36 951 aaKnown RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CLEC4CQ8WTT0 213 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CORO1BQ9BR76 489 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 TTYH2Q9BSA4 534 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CNPPD1Q9BV87 410 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 DUSP21Q9H596 190 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 KAT8Q9H7Z6 458 aaKnown RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CCDC177Q9NQR7 707 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 EXD2Q9NVH0 621 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 COL4A4P53420 1690 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 OR6C70A6NIJ9 312 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 C12orf71A8MTZ7 269 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 I3L521 148 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 HAT1O14929 419 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SLC16A6O15403 523 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 UGT2B11O75310 529 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 IGHA2P01877 340 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 GJB1P08034 283 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 RAP2AP10114 183 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CDH1P12830 882 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 IL7RP16871 459 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 NRIP1P48552 1158 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 FGD3Q5JSP0 725 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 UGT3A1Q6NUS8 523 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF783Q6ZMS7 281 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 TMEM199Q8N511 208 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 FBXO22Q8NEZ5 403 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 METTL6Q8TCB7 284 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 POF1BQ8WVV4 589 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 AP5M1Q9H0R1 490 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 MIR1-1HGQ9H1L0 117 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ABCG8Q9H221 673 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 TPK1Q9H3S4 243 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 AASDHPPTQ9NRN7 309 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 PCDHB1Q9Y5F3 818 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms