RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ZNF831Q5JPB2 1677 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 SYNDIG1LA6NDD5 238 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 LOC730098B7Z3J9 87 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 SLC28A1O00337 649 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 CLPXO76031 633 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 ELNP15502 786 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 PTGER3P43115 390 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 RPIAP49247 311 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 HLCSP50747 726 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 KANK2Q63ZY3 851 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 RBFAQ8N0V3 343 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 FRS2Q8WU20 508 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 ITFG2Q969R8 447 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 BIRC8Q96P09 236 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 LHPPQ9H008 270 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 LSM7Q9UK45 103 aaKnown RBP15.86■□□□□ 0.13
PCDH1-203ENST00000394536 GPR45Q9Y5Y3 372 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 LOC100130705A0A1B0GUX0 176 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 RBM47A0AV96 593 aaKnown RBP15.86■□□□□ 0.13
PCDH1-203ENST00000394536 MUSKO15146 869 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 FGF4P08620 206 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 TYMPP19971 482 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 POLR2IP36954 125 aaKnown RBP15.86■□□□□ 0.13
PCDH1-203ENST00000394536 MAPKAPK2P49137 400 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 FLT3LGP49771 235 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 VBP1P61758 197 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 FOXM1Q08050 763 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 TOP3AQ13472 1001 aaPredicted RBP15.86■□□□□ 0.13
PCDH1-203ENST00000394536 SLC36A3Q495N2 470 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 C6orf141Q5SZD1 244 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 LETMD1Q6P1Q0 360 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 FAM171BQ6P995 826 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 ZNF419Q96HQ0 510 aaPredicted RBP15.86■□□□□ 0.13
PCDH1-203ENST00000394536 ABHD8Q96I13 439 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 ATOH8Q96SQ7 321 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 MYOCQ99972 504 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 LTB4R2Q9NPC1 389 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 ABCB7O75027 752 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 AGXTP21549 392 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 CRATP43155 626 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 CLCN2P51788 898 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 NPTX1Q15818 432 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 GPR153Q6NV75 609 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 MBOAT1Q6ZNC8 495 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 SLC24A5Q71RS6 500 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 P2RY8Q86VZ1 359 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 SVOPQ8N4V2 548 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 CSNK1G1Q9HCP0 422 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 POLE4Q9NR33 117 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 NUDT4Q9NZJ9 180 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 GLUD1P00367 558 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 MAPK1P28482 360 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 CSTF3Q12996 717 aaKnown RBP15.85■□□□□ 0.13
PCDH1-203ENST00000394536 MADCAM1Q13477 382 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 SELPLGQ14242 412 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 CYP2A13Q16696 494 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 DEFB128Q7Z7B8 93 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 ARRDC2Q8TBH0 407 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 C1orf74Q96LT6 269 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 OAS3Q9Y6K5 1087 aaKnown RBP15.85■□□□□ 0.13
PCDH1-203ENST00000394536 H0Y858 1186 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 PGLSO95336 258 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 PIK3C3Q8NEB9 887 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 STON2Q8WXE9 905 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 VAPAQ9P0L0 249 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 PCTPQ9UKL6 214 aa15.85■□□□□ 0.13
PCDH1-203ENST00000394536 ARIH1Q9Y4X5 557 aaPredicted RBP15.85■□□□□ 0.13
PCDH1-203ENST00000394536 GON4LQ3T8J9 2241 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 DYTNA2CJ06 578 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 KIR3DL1P43629 444 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 RGRP47804 291 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 ALDH3B2P48448 385 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 UBE3AQ05086 875 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 TBPL2Q6SJ96 375 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 PGBD5Q8N414 524 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 MFSD2AQ8NA29 543 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 ZNF420Q8TAQ5 688 aaPredicted RBP15.84■□□□□ 0.13
PCDH1-203ENST00000394536 HMGCLL1Q8TB92 370 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 RTP3Q9BQQ7 232 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 ARNT2Q9HBZ2 717 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.84■□□□□ 0.13
PCDH1-203ENST00000394536 DUSP12Q9UNI6 340 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 THSD7AQ9UPZ6 1657 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 TRIM43BA6NCK2 446 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 H7C4K7 107 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 PER2O15055 1255 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 SERPIND1P05546 499 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 POU2F1P14859 743 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 MAP2K4P45985 399 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 RPS14P62263 151 aaKnown RBP15.84■□□□□ 0.13
PCDH1-203ENST00000394536 ABRQ12979 859 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 AAK1Q2M2I8 961 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 UBE2R2Q712K3 238 aaPredicted RBP15.84■□□□□ 0.13
PCDH1-203ENST00000394536 HIPK1Q86Z02 1210 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 TICAM1Q8IUC6 712 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 EPHX4Q8IUS5 362 aa15.84■□□□□ 0.13
PCDH1-203ENST00000394536 MTERF1Q99551 399 aaKnown RBP15.84■□□□□ 0.13
PCDH1-203ENST00000394536 FARSBQ9NSD9 589 aaKnown RBP15.84■□□□□ 0.13
PCDH1-203ENST00000394536 MTRRQ9UBK8 725 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms