RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 MYO1CO00159 1063 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 KATNA1O75449 491 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 STK16O75716 305 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 OR4F21O95013 312 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 ESRRBO95718 433 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 CHEK2O96017 543 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 IL9P15248 144 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 NDUFV2P19404 249 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 CALB2P22676 271 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 PDHA2P29803 388 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 CPA2P48052 419 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 CCNG1P51959 295 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 SP140Q13342 867 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 CCINQ13939 588 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 FGL2Q14314 439 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 LEXMQ3ZCV2 418 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 KANK2Q63ZY3 851 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 FAM91A1Q658Y4 838 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 TMEM198Q66K66 360 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 KBTBD6Q86V97 674 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 HORMAD1Q86X24 394 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 OR52B6Q8NGF0 335 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 TWIST2Q8WVJ9 160 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 HMGB4Q8WW32 186 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 GLMNQ92990 594 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 C19orf60Q96EN9 201 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 PTCD3Q96EY7 689 aaKnown RBP8.45□□□□□ -1.06
TDP1-203ENST00000393454 COX14Q96I36 57 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 MARK4Q96L34 752 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 MRGPRX1Q96LB2 322 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 CDK15Q96Q40 435 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 MYOCQ99972 504 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 TMEM79Q9BSE2 394 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 LGR4Q9BXB1 951 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 C1QTNF7Q9BXJ2 289 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 C1QTNF2Q9BXJ5 285 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 IPPKQ9H8X2 491 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 MEAF6Q9HAF1 191 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 SLC2A4RGQ9NR83 387 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 PHPT1Q9NRX4 125 aaPredicted RBP8.45□□□□□ -1.06
TDP1-203ENST00000393454 ZNHIT2Q9UHR6 403 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 TAGLN3Q9UI15 199 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 MMP17Q9ULZ9 603 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 BTRCQ9Y297 605 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 DNAJC15Q9Y5T4 150 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 ATP6AP2A0A1C7CYW4 349 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 KRT87PA6NCN2 255 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 GFYI3L273 518 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 K7EPI3 171 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 MAN2B1O00754 1011 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 LIN7AO14910 233 aaPredicted RBP8.45□□□□□ -1.06
TDP1-203ENST00000393454 PIP5K1BO14986 540 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 SLC31A1O15431 190 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 HNRNPCL1O60812 293 aaKnown RBP8.45□□□□□ -1.06
TDP1-203ENST00000393454 LILRB5O75023 590 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 ATP6AP2O75787 350 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 LINC00032P0C843 101 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 UROSP10746 265 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 PKNOX1P55347 436 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 MXRA7P84157 204 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 AGERQ15109 404 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 MLF2Q15773 248 aaPredicted RBP8.45□□□□□ -1.06
TDP1-203ENST00000393454 UGT3A2Q3SY77 523 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 ZNF852Q6ZMS4 543 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 MILR1Q7Z6M3 343 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 SLC22A15Q8IZD6 547 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 TCAIMQ8N3R3 496 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 CDYL2Q8N8U2 506 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 SNX31Q8N9S9 440 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 TP53I13Q8NBR0 393 aaPredicted RBP8.45□□□□□ -1.06
TDP1-203ENST00000393454 ACTRT2Q8TDY3 377 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 FOXJ1Q92949 421 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 ZNF382Q96SR6 550 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 CD248Q9HCU0 757 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 PREBQ9HCU5 417 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 FZD3Q9NPG1 666 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 CD93Q9NPY3 652 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.45□□□□□ -1.06
TDP1-203ENST00000393454 CIDEBQ9UHD4 219 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 MOSPD1Q9UJG1 213 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 FZD4Q9ULV1 537 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 GPR34Q9UPC5 381 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 PTGDR2Q9Y5Y4 395 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 CFAP73A6NFT4 308 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 SHISA7A6NL88 538 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 B2RBV5 119 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 OR7A17O14581 309 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 UBDO15205 165 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 MATN4O95460 622 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 OTCP00480 354 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 CATP04040 527 aaKnown RBP8.44□□□□□ -1.06
TDP1-203ENST00000393454 GSTM1P09488 218 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 EPB42P16452 691 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 PTPN4P29074 926 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 BDKRB1P46663 353 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 AP1S2P56377 157 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 KCNJ2P63252 427 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 CDKL1Q00532 357 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 GSTM4Q03013 218 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 TFF2Q03403 129 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms