RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 VIPR1P32241 457 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 CHN2P52757 468 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 CDKL1Q00532 357 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 LIPEQ05469 1076 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 GBX1Q14549 363 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 ZNF697Q5TEC3 545 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 UBE2R2Q712K3 238 aaPredicted RBP25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 GRASPQ7Z6J2 395 aaPredicted RBP25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 NUDT8Q8WV74 236 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 ING5Q8WYH8 240 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 SCAMP4Q969E2 229 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 TMEM74Q96NL1 305 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 COQ10BQ9H8M1 238 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 CCM2LQ9NUG4 571 aaPredicted RBP25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 DYTNA2CJ06 578 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 MAP3K13O43283 966 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 RGS14O43566 566 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 CYP2A6P11509 494 aaPredicted RBP25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 ZNF30P17039 623 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 HSPA13P48723 471 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 RPL38P63173 70 aaKnown RBP25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 FPGSQ05932 587 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 ARSIQ5FYB1 569 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 TMEM240Q5SV17 173 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 NANOGP8Q6NSW7 305 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 SPRED2Q7Z698 418 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 IFNEQ86WN2 208 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 NANOGQ9H9S0 305 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 MARK1Q9P0L2 795 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 C15orf38-AP3S2A0A0A6YYH1 394 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 SOBPA7XYQ1 873 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 SLC28A1O00337 649 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 MTX2O75431 263 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 RSL1D1O76021 490 aaKnown RBP25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 WDR47O94967 919 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 WEE1P30291 646 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 HOXA9P31269 272 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 CBX2Q14781 532 aaPredicted RBP25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 AAK1Q2M2I8 961 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 SGO1Q5FBB7 561 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 CDKL4Q5MAI5 379 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 C6orf52Q5T4I8 152 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 RNF165Q6ZSG1 346 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 ARPINQ7Z6K5 226 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 VRK3Q8IV63 474 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 DPP10Q8N608 796 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 LEMD2Q8NC56 503 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 PPWD1Q96BP3 646 aaKnown RBP25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 MTG2Q9H4K7 406 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 UBAP1Q9NZ09 502 aa25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 ZNF490Q9ULM2 529 aaPredicted RBP25.07■■□□□ 1.6
SMARCD3-203ENST00000392811 DHRS12A0PJE2 317 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 MANBAO00462 879 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 NUAK1O60285 661 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 XYLBO75191 536 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 ULK1O75385 1050 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 NPPAP01160 153 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 HMGCS1Q01581 520 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 INPP5AQ14642 412 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 SERPINA13PQ6UXR4 307 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 ST13P4Q8IZP2 240 aaPredicted RBP25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 PIP4K2CQ8TBX8 421 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 SKA2Q8WVK7 121 aaPredicted RBP25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 KCTD14Q9BQ13 255 aaPredicted RBP25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 SLC12A9Q9BXP2 914 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 SLC2A11Q9BYW1 496 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 FAM83DQ9H4H8 585 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 PCDH12Q9NPG4 1184 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 SMOXQ9NWM0 555 aa25.06■■□□□ 1.6
SMARCD3-203ENST00000392811 PRRC2BQ5JSZ5 2229 aaKnown RBP25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 GRXCR2A6NFK2 248 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 CEBPBP17676 345 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 EPORP19235 508 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 JAK1P23458 1154 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 DGKQP52824 942 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 EEFSECP57772 596 aaKnown RBP25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 BOP1Q14137 746 aaKnown RBP25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 NRF1Q16656 503 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 FOXB2Q5VYV0 432 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 Q6ZVL8 140 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 TRIM46Q7Z4K8 759 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 OTUB2Q96DC9 234 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 SLC32A1Q9H598 525 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 PARVBQ9HBI1 364 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 AURKCQ9UQB9 309 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 AKAP10O43572 662 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 C8GP07360 202 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 CTSLP07711 333 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 ENO2P09104 434 aaPredicted RBP25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 HNRNPA1P09651 372 aaKnown RBP eCLIP25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 TIMP2P16035 220 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 GGT5P36269 586 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 CAMK1Q14012 370 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 ZXDCQ2QGD7 858 aaPredicted RBP25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 TBCELQ5QJ74 424 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 DLEU7Q6UYE1 221 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 ERMP1Q7Z2K6 904 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 PTRH1Q86Y79 214 aaKnown RBP25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 GOLM1Q8NBJ4 401 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 ASB11Q8WXH4 323 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms