RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 TMEM125Q96AQ2 219 aa16.72■□□□□ 0.27
TRAF3IP1-202ENST00000391993 ROBO1Q9Y6N7 1651 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 RFXANKO14593 260 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 SCAMP3O14828 347 aaKnown RBP16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 PLD2O14939 933 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 MYL12BO14950 172 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 OPN1SWP03999 348 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 IL7P13232 177 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 TECRLQ5HYJ1 363 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 LINGO1Q96FE5 620 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 HAT1O14929 419 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 VPS4BO75351 444 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 TOXO94900 526 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 GPX3P22352 226 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 NKX3-2P78367 333 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 CYP27C1Q4G0S4 372 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 SPANXN4Q5MJ08 99 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 XRRA1Q6P2D8 792 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 MINDY1Q8N5J2 469 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 VANGL1Q8TAA9 524 aaPredicted RBP16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 ASB2Q96Q27 587 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 PANX1Q96RD7 426 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 CATSPERZQ9NTU4 200 aa16.71■□□□□ 0.27
TRAF3IP1-202ENST00000391993 UPK3BL1B0FP48 263 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 UPK3BL2E5RIL1 263 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 HOXC11O43248 304 aaPredicted RBP16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 HBP1O60381 514 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 RECQL4O94761 1208 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 HSD17B1P14061 328 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 GLUD2P49448 558 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 C1DQ13901 141 aaKnown RBP16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 SELPLGQ14242 412 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 STARD3Q14849 445 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 ZNF181Q2M3W8 571 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 C15orf52Q6ZUT6 534 aaKnown RBP16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 LRRC17Q8N6Y2 441 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 ATP6V0D2Q8N8Y2 350 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 SLC13A3Q8WWT9 602 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 ASB12Q8WXK4 309 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 FRMD6Q96NE9 622 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 GPR78Q96P69 363 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 NEDD4LQ96PU5 975 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 UTS2RQ9UKP6 389 aa16.71■□□□□ 0.26
TRAF3IP1-202ENST00000391993 AGAP5A6NIR3 686 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 PER2O15055 1255 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 SSX4O60224 188 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 GSTM1P09488 218 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 CKMT1AP12532 417 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 CAMK2BQ13554 666 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 NCF4Q15080 339 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 LSM14AQ8ND56 463 aaKnown RBP16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 RTP4Q96DX8 246 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 SEMA3CQ99985 751 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 COLEC11Q9BWP8 271 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 NECTIN3Q9NQS3 549 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 MTMR10Q9NXD2 777 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 CD300AQ9UGN4 299 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 PRKCAP17252 672 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 CA5AP35218 305 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 GP2P55259 537 aaKnown RBP16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 SPIBQ01892 262 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 DCAF4L1Q3SXM0 396 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 RUNDC3AQ59EK9 446 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 DOK6Q6PKX4 331 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 B3GNT9Q6UX72 402 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 PTCHD4Q6ZW05 846 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 FAM20CQ8IXL6 584 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 SLC38A6Q8IZM9 456 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 OR13C4Q8NGS5 318 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 SPASTQ9UBP0 616 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 TLL1O43897 1013 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 KIAA0513O60268 411 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 ULK1O75385 1050 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 PPP3CCP48454 512 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 HSPA7P48741 367 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 POU6F2P78424 691 aaPredicted RBP16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 BLOC1S3Q6QNY0 202 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 CHMP1BQ7LBR1 199 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 CYP4Z1Q86W10 505 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 STK40Q8N2I9 435 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 SLC38A4Q969I6 547 aa16.7■□□□□ 0.26
TRAF3IP1-202ENST00000391993 IFRD1O00458 451 aaPredicted RBP16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 NPR3P17342 541 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 IL2P60568 153 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 TJP1Q07157 1748 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 CTU2Q2VPK5 515 aaKnown RBP16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 RASSF6Q6ZTQ3 369 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 AKAP1Q92667 903 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 MAP6Q96JE9 813 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 TEX37Q96LM6 180 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 MKRN2Q9H000 416 aaKnown RBP16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 TNFSF13BQ9Y275 285 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 GSAPA4D1B5 854 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 OR7A10O76100 309 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 APOL3O95236 402 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 TIE1P35590 1138 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 GRSF1Q12849 480 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 WSCD2Q2TBF2 565 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 USP41Q3LFD5 358 aa16.69■□□□□ 0.26
TRAF3IP1-202ENST00000391993 NBPF12Q5TAG4 269 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms