RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 H2AFJQ9BTM1 129 aa0.54□□□□□ -2.32
SNORA40-201ENST00000388090 TMX4Q9H1E5 349 aaPredicted RBP0.54□□□□□ -2.32
SNORA40-201ENST00000388090 SEMA6AQ9H2E6 1030 aa0.54□□□□□ -2.32
SNORA40-201ENST00000388090 TAOK3Q9H2K8 898 aa0.54□□□□□ -2.32
SNORA40-201ENST00000388090 NTN4Q9HB63 628 aa0.54□□□□□ -2.32
SNORA40-201ENST00000388090 GPN1Q9HCN4 374 aaPredicted RBP0.54□□□□□ -2.32
SNORA40-201ENST00000388090 IL17BQ9UHF5 180 aa0.54□□□□□ -2.32
SNORA40-201ENST00000388090 A4GNTQ9UNA3 340 aa0.54□□□□□ -2.32
SNORA40-201ENST00000388090 TMEM184BQ9Y519 407 aaPredicted RBP0.54□□□□□ -2.32
SNORA40-201ENST00000388090 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
SNORA40-201ENST00000388090 IGLV4-3A0A075B6K6 122 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 A0A087WV62 115 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 E7ENQ6 273 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 VTNP04004 478 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 URODP06132 367 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 H1F0P07305 194 aaKnown RBP0.53□□□□□ -2.32
SNORA40-201ENST00000388090 HSD3B1P14060 373 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 MDKP21741 143 aaPredicted RBP0.53□□□□□ -2.32
SNORA40-201ENST00000388090 CA6P23280 308 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 CSNK2BP67870 215 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 PDE1CQ14123 709 aaPredicted RBP0.53□□□□□ -2.32
SNORA40-201ENST00000388090 ALG11Q2TAA5 492 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 COL28A1Q2UY09 1125 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 TTC31Q49AM3 519 aaPredicted RBP0.53□□□□□ -2.32
SNORA40-201ENST00000388090 CELF3Q5SZQ8 465 aaKnown RBP0.53□□□□□ -2.32
SNORA40-201ENST00000388090 CES4AQ5XG92 561 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 HAUS6Q7Z4H7 955 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 C17orf53Q8N3J3 647 aaPredicted RBP0.53□□□□□ -2.32
SNORA40-201ENST00000388090 Q8N9L7 120 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 CSNK1G2-AS1Q8NCQ2 148 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 ELP4Q96EB1 424 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 C10orf90Q96M02 699 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 RMDN3Q96TC7 470 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 ATF6BQ99941 703 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 PHF7Q9BWX1 381 aaPredicted RBP0.53□□□□□ -2.32
SNORA40-201ENST00000388090 STRA6Q9BX79 667 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 HES7Q9BYE0 225 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 SLC28A3Q9HAS3 691 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP0.53□□□□□ -2.32
SNORA40-201ENST00000388090 SDR39U1Q9NRG7 319 aaPredicted RBP0.53□□□□□ -2.32
SNORA40-201ENST00000388090 RCC2Q9P258 522 aaKnown RBP0.53□□□□□ -2.32
SNORA40-201ENST00000388090 PPP2R2CQ9Y2T4 447 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 WIPI2Q9Y4P8 454 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 PTCH1Q13635 1447 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 POGZQ7Z3K3 1410 aa0.53□□□□□ -2.32
SNORA40-201ENST00000388090 hCG_2014768A0A024R1R8 64 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 VWA3AA6NCI4 1184 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 IPO5O00410 1097 aaKnown RBP0.52□□□□□ -2.33
SNORA40-201ENST00000388090 SEC24AO95486 1093 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 ASNSP08243 561 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 HRH2P25021 359 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 HLA-FP30511 346 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 CDAP32320 146 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 TSFMP43897 325 aaKnown RBP0.52□□□□□ -2.33
SNORA40-201ENST00000388090 RGRP47804 291 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 HERV-K104P61576 105 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 MECOMQ03112 1051 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 EBI3Q14213 229 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 FGFBP1Q14512 234 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 DRAP1Q14919 205 aaPredicted RBP0.52□□□□□ -2.33
SNORA40-201ENST00000388090 PGBD2Q6P3X8 592 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 KLC3Q6P597 504 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 TMEM57Q8N5G2 664 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 USP38Q8NB14 1042 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 TNIP2Q8NFZ5 429 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 OR14L1PQ8NHC6 308 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 HM13Q8TCT9 377 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 GATAD1Q8WUU5 269 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 CNRIP1Q96F85 164 aaPredicted RBP0.52□□□□□ -2.33
SNORA40-201ENST00000388090 RRNAD1Q96FB5 475 aaKnown RBP0.52□□□□□ -2.33
SNORA40-201ENST00000388090 NECTIN4Q96NY8 510 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 GFI1Q99684 422 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 LBHD1Q9BQE6 289 aaPredicted RBP0.52□□□□□ -2.33
SNORA40-201ENST00000388090 OVOL2Q9BRP0 275 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 MAGIXQ9H6Y5 334 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 A4GALTQ9NPC4 353 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 B3GAT2Q9NPZ5 323 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 MIOSQ9NXC5 875 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 CLEC5AQ9NY25 188 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 COPG2Q9UBF2 871 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 GTF3C4Q9UKN8 822 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 B3GALT5Q9Y2C3 310 aa0.52□□□□□ -2.33
SNORA40-201ENST00000388090 AAR2Q9Y312 384 aaKnown RBP0.52□□□□□ -2.33
SNORA40-201ENST00000388090 GOLGA6L10A0A0M3HER8 536 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 USP17L23D6RBM5 183 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 PANO1I0J062 215 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 KLK10O43240 276 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 SH3BGRLO75368 114 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 BCL10O95999 233 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 LHCGRP22888 699 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 PDHA2P29803 388 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 ADD2P35612 726 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 GNAQP50148 359 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 AK2P54819 239 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 FOXO1Q12778 655 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 MS4A18Q3C1V0 323 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 SPECC1Q5M775 1068 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 SERINC5Q86VE9 423 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 OR4N5Q8IXE1 308 aa0.51□□□□□ -2.33
SNORA40-201ENST00000388090 PHF10Q8WUB8 498 aaKnown RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms