RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 PTPN2P17706 415 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 XRCC1P18887 633 aaPredicted RBP10.63□□□□□ -0.71
NEDD9-201ENST00000379433 HMGCLP35914 325 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 HK3P52790 923 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 STX1BP61266 288 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 NFATC2Q13469 925 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 C9orf50Q5SZB4 431 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 ANKS6Q68DC2 871 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 TMEM214Q6NUQ4 689 aaKnown RBP10.63□□□□□ -0.71
NEDD9-201ENST00000379433 CCDC81Q6ZN84 652 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 Q6ZNB5 142 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 ADGRD2Q7Z7M1 963 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 KLHDC8BQ8IXV7 354 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 SPPL3Q8TCT6 385 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 ZNF570Q96NI8 536 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 ZBTB26Q9HCK0 441 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 NMRK1Q9NWW6 199 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 POMPQ9Y244 141 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 ANAPC1Q9H1A4 1944 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 AZIN1O14977 448 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 SCAMP1O15126 338 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 TSPAN6O43657 245 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 LEFTY1O75610 366 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 PBX2P40425 430 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 RUNX1T1Q06455 604 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 ARHGAP15Q53QZ3 475 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 TMEM215Q68D42 235 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 C22orf39Q6P5X5 142 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 SERPINA13PQ6UXR4 307 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 GALNT7Q86SF2 657 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 CLHC1Q8NHS4 586 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 SMG7Q92540 1137 aaKnown RBP10.63□□□□□ -0.71
NEDD9-201ENST00000379433 IRF7Q92985 503 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 LRRC3BQ96PB8 259 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 MRPL1Q9BYD6 325 aaKnown RBP10.63□□□□□ -0.71
NEDD9-201ENST00000379433 TPK1Q9H3S4 243 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 ZFP14Q9HCL3 533 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 B4GALT6Q9UBX8 382 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 ADAMTS6Q9UKP5 1117 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 GTF2A1LQ9UNN4 478 aa10.63□□□□□ -0.71
NEDD9-201ENST00000379433 LINC01553A4QN01 128 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 UPK3BL1B0FP48 263 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 UPK3BL2E5RIL1 263 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 NVLO15381 856 aaKnown RBP10.62□□□□□ -0.71
NEDD9-201ENST00000379433 SNX4O95219 450 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 ZNF7P17097 686 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-201ENST00000379433 POLR2EP19388 210 aaKnown RBP10.62□□□□□ -0.71
NEDD9-201ENST00000379433 LHCGRP22888 699 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 PPP3CCP48454 512 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 NRIP1P48552 1158 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 FLOT2Q14254 428 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 TGFBIQ15582 683 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 TRIP10Q15642 601 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 PHKG1Q16816 387 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 MYLK3Q32MK0 819 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 C5orf22Q49AR2 442 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 WASHC2DQ5SRD0 308 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 LILRA6Q6PI73 481 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 LRRC74BQ6ZQY2 392 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 METTL6Q8TCB7 284 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 ACDQ96AP0 544 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 CCDC126Q96EE4 140 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 ATOH8Q96SQ7 321 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 SEMA6AQ9H2E6 1030 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 SUV39H2Q9H5I1 410 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 BRD9Q9H8M2 597 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 INIPQ9NRY2 104 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 NDE1Q9NXR1 346 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 STOML1Q9UBI4 398 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 EGFL7Q9UHF1 273 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 PLXNA3P51805 1871 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 LAMA1P25391 3075 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 ARHGAP10A1A4S6 786 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 ZNF821O75541 412 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-201ENST00000379433 HEXBP07686 556 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 OGNP20774 298 aaKnown RBP10.62□□□□□ -0.71
NEDD9-201ENST00000379433 DPP6P42658 865 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 CLCN4P51793 760 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 DAB2P98082 770 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 CACNG1Q06432 222 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 E2F2Q14209 437 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 PTK2BQ14289 1009 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 C6orf132Q5T0Z8 1188 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 IL27RAQ6UWB1 636 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 HTR3DQ70Z44 454 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 NCLNQ969V3 563 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 SIKE1Q9BRV8 207 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 ATG10Q9H0Y0 220 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 SPHK2Q9NRA0 654 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 WWOXQ9NZC7 414 aa10.62□□□□□ -0.71
NEDD9-201ENST00000379433 HAT1O14929 419 aa10.61□□□□□ -0.71
NEDD9-201ENST00000379433 NPHS1O60500 1241 aa10.61□□□□□ -0.71
NEDD9-201ENST00000379433 GMNNO75496 209 aa10.61□□□□□ -0.71
NEDD9-201ENST00000379433 OR5F1O95221 314 aa10.61□□□□□ -0.71
NEDD9-201ENST00000379433 POU2F1P14859 743 aa10.61□□□□□ -0.71
NEDD9-201ENST00000379433 RFC2P35250 354 aa10.61□□□□□ -0.71
NEDD9-201ENST00000379433 NNMTP40261 264 aa10.61□□□□□ -0.71
NEDD9-201ENST00000379433 ARHGDIBP52566 201 aa10.61□□□□□ -0.71
NEDD9-201ENST00000379433 LIMK1P53667 647 aa10.61□□□□□ -0.71
NEDD9-201ENST00000379433 XIAPP98170 497 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms