RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 DCAF10Q5QP82 559 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 CDHR3Q6ZTQ4 885 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 TRIM73Q86UV7 250 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 ZC3H18Q86VM9 953 aaKnown RBP17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 GPR135Q8IZ08 494 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 ACVR1CQ8NER5 493 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 ZFPM2Q8WW38 1151 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 INPP5DQ92835 1189 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 HAUS1Q96CS2 278 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 DCUN1D1Q96GG9 259 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 OXNAD1Q96HP4 312 aaPredicted RBP17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 FER1L6-AS2Q96M78 137 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 HGH1Q9BTY7 390 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 FSD1LQ9BXM9 530 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 IRAK4Q9NWZ3 460 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 LCMT1Q9UIC8 334 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 FKBPLQ9UIM3 349 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 CAPN11Q9UMQ6 739 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 HEBP2Q9Y5Z4 205 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 SVILO95425 2214 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 CCDC66A2RUB6 948 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 MATN2O00339 956 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 PECAM1P16284 738 aaPredicted RBP17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 WASHC5Q12768 1159 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 MYBPC3Q14896 1274 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 MFSD7Q6UXD7 560 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 SPOCD1Q6ZMY3 1216 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 PID1Q7Z2X4 250 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 HOOK3Q86VS8 718 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 TICAM1Q8IUC6 712 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 ZADH2Q8N4Q0 377 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 PHC3Q8NDX5 983 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 OR4K2Q8NGD2 314 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 TRAPPC9Q96Q05 1148 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 FICDQ9BVA6 458 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 FAM96AQ9H5X1 160 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 ZBTB20Q9HC78 741 aaPredicted RBP17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 SYTL2Q9HCH5 934 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 SMOXQ9NWM0 555 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 NDOR1Q9UHB4 597 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 CRLS1Q9UJA2 301 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 NENFQ9UMX5 172 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 NTNG1Q9Y2I2 539 aa17.23■□□□□ 0.35
PDLIM4-202ENST00000379018 ZNF487B1APH4 448 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 ALOX12BO75342 701 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 KLF7O75840 302 aaPredicted RBP17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 MBD3O95983 291 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 UBASH3AP57075 661 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 TMPRSS15P98073 1019 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 PRKG2Q13237 762 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 CUZD1Q86UP6 607 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 TMEM151BQ8IW70 566 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 OR52E1Q8NGJ3 308 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 SLC35G2Q8TBE7 412 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 HM13Q8TCT9 377 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 DTX3LQ8TDB6 740 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 UBE2Q2Q8WVN8 375 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 TM9SF4Q92544 642 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 PHF12Q96QT6 1004 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 DPH2Q9BQC3 489 aaPredicted RBP17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 DHRS4Q9BTZ2 278 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 ZNF552Q9H707 407 aaPredicted RBP17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 P4HTMQ9NXG6 502 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 ACTR10Q9NZ32 417 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 RSPH14Q9UHP6 348 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 CDYLQ9Y232 598 aa17.22■□□□□ 0.35
PDLIM4-202ENST00000379018 C2orf74A8MZ97 194 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 IFRD1O00458 451 aaPredicted RBP17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 CST8O60676 142 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 OR2B3O76000 313 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 SRP72O76094 671 aaKnown RBP17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 AGTP01019 485 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 GYPCP04921 128 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 HBQ1P09105 142 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 RALBP11234 206 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 ITGA3P26006 1051 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 PBX1P40424 430 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 SSPNQ14714 243 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 NAA30Q147X3 362 aaPredicted RBP17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 HIF1AQ16665 826 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 CYP2A13Q16696 494 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 BCL7AQ4VC05 210 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 ZNF385CQ66K41 422 aaPredicted RBP17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 ZNF567Q8N184 647 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 MARVELD3Q96A59 401 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 CNDP1Q96KN2 507 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 IP6K3Q96PC2 410 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 APOL2Q9BQE5 337 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 CCM2Q9BSQ5 444 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 SPRTNQ9H040 489 aaPredicted RBP17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 IFT80Q9P2H3 777 aaPredicted RBP17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 DHCR7Q9UBM7 475 aaKnown RBP17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 OSGIN2Q9Y236 505 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 PCDHGA10Q9Y5H3 936 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 CSAG2Q9Y5P2 127 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 ZGRF1Q86YA3 2104 aa17.21■□□□□ 0.35
PDLIM4-202ENST00000379018 LRRTM2O43300 516 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 SGTAO43765 313 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 EPOP01588 193 aa17.2■□□□□ 0.34
PDLIM4-202ENST00000379018 TMEM253P0C7T8 217 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms