RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 AHSA2Q719I0 299 aa16.9■□□□□ 0.3
MCF2L-203ENST00000375604 LYSMD3Q7Z3D4 306 aa16.9■□□□□ 0.3
MCF2L-203ENST00000375604 TMEM145Q8NBT3 493 aa16.9■□□□□ 0.3
MCF2L-203ENST00000375604 CRNNQ9UBG3 495 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-203ENST00000375604 YIPF1Q9Y548 306 aa16.9■□□□□ 0.3
MCF2L-203ENST00000375604 TAF4O00268 1085 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 RLN1P04808 185 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 ACTR1BP42025 376 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 ACTR1AP61163 376 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 MBLAC2Q68D91 279 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 GDPD4Q6W3E5 623 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 LENG8Q96PV6 779 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-203ENST00000375604 IFT172Q9UG01 1749 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 ITM2AO43736 263 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 TRIM3O75382 744 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-203ENST00000375604 PDHA2P29803 388 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 CHST4Q8NCG5 386 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 TEFMQ96QE5 360 aaKnown RBP16.89■□□□□ 0.29
MCF2L-203ENST00000375604 TLR6Q9Y2C9 796 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 NDUFS4O43181 175 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 SEPHS1P49903 392 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 DCST1Q5T197 706 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 SLCO6A1Q86UG4 719 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 TRPV3Q8NET8 790 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 HTRA1Q92743 480 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 PIWIL1Q96J94 861 aaKnown RBP16.89■□□□□ 0.29
MCF2L-203ENST00000375604 C11orf84Q9BUA3 381 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-203ENST00000375604 DIABLOQ9NR28 239 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 COMMD9Q9P000 198 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 COPS7AQ9UBW8 275 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 BTN3A3O00478 584 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 SIX3O95343 332 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-203ENST00000375604 CCT3P49368 545 aaKnown RBP16.89■□□□□ 0.29
MCF2L-203ENST00000375604 NFKB2Q00653 900 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 FAM174BQ3ZCQ3 159 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 ATP13A5Q4VNC0 1218 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 NCBP2-AS2Q69YL0 99 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 OR2T34Q8NGX1 318 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 OR2T3Q8NH03 318 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 BRSK1Q8TDC3 778 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 TMEM209Q96SK2 561 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 KCTD3Q9Y597 815 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 A0A1W2PQ45 241 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-203ENST00000375604 A0A1W2PQY0 241 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 C8orf89P0DMQ9 161 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 TIMM50Q3ZCQ8 353 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 LRRC57Q8N9N7 239 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 OR2L5Q8NG80 312 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 CLK4Q9HAZ1 481 aaKnown RBP16.89■□□□□ 0.29
MCF2L-203ENST00000375604 PLGRKTQ9HBL7 147 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 PHF24Q9UPV7 400 aa16.89■□□□□ 0.29
MCF2L-203ENST00000375604 QPRTQ15274 297 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 CHRNA6Q15825 494 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 AHI1Q8N157 1196 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 OR10Q1Q8NGQ4 319 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 SNX33Q8WV41 574 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 RSL24D1Q9UHA3 163 aaKnown RBP16.88■□□□□ 0.29
MCF2L-203ENST00000375604 DHRS7Q9Y394 339 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 STX16-NPEPL1H3BU86 382 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 STX16O14662 325 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 INPPL1O15357 1258 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 ECDO95905 644 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-203ENST00000375604 BTN3A2P78410 334 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 HMGCS1Q01581 520 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 CMTM8Q8IZV2 173 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 RWDD3Q9Y3V2 267 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 TMEM233B4DJY2 109 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 AMZ2Q86W34 360 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 ATCAYQ86WG3 371 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 HOPXQ9BPY8 73 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-203ENST00000375604 OSBPL11Q9BXB4 747 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 RCOR3Q9P2K3 495 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-203ENST00000375604 MED31Q9Y3C7 131 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 CICQ96RK0 1608 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-203ENST00000375604 FAM86C2PA6NEL3 165 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 MAGEB17A8MXT2 336 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 BNC1Q01954 994 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 SULT1C3Q6IMI6 304 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 COX18Q8N8Q8 333 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 PNPLA3Q9NST1 481 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 CXorf49A8MYA2 514 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-203ENST00000375604 CLEC12AQ5QGZ9 265 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 EBF4Q9BQW3 602 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 FZD8Q9H461 694 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 TBC1D17Q9HA65 648 aa16.88■□□□□ 0.29
MCF2L-203ENST00000375604 PDE12Q6L8Q7 609 aaKnown RBP16.87■□□□□ 0.29
MCF2L-203ENST00000375604 PGBD2Q6P3X8 592 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 OSTM1Q86WC4 334 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 KCND1Q9NSA2 647 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 HS3ST4Q9Y661 456 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 CDK9P50750 372 aaKnown RBP16.87■□□□□ 0.29
MCF2L-203ENST00000375604 LCP2Q13094 533 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 ANKRD26P1Q6NSI1 321 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 FBXL22Q6P050 247 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 PAQR3Q6TCH7 311 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 ZNF662Q6ZS27 426 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 SNX20Q7Z614 316 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 CLNKQ7Z7G1 428 aa16.87■□□□□ 0.29
MCF2L-203ENST00000375604 APLFQ8IW19 511 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-203ENST00000375604 WDR26Q9H7D7 661 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms