RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 COLEC12Q5KU26 742 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 WDR5BQ86VZ2 330 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 OR5M1Q8NGP8 315 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 ELP5Q8TE02 316 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 BRI3BPQ8WY22 251 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 FAM162AQ96A26 154 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 LURAP1Q96LR2 239 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 COPS4Q9BT78 406 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 RAB17Q9H0T7 212 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 SOX17Q9H6I2 414 aaPredicted RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 ELP3Q9H9T3 547 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 PIDD1Q9HB75 910 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 ABCB9Q9NP78 766 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 THUMPD1Q9NXG2 353 aaKnown RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 MARCH11A6NNE9 402 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 PP2D1A8MPX8 630 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 LUC7L3O95232 432 aaKnown RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 TCP1P17987 556 aaKnown RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 DRD5P21918 477 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 ALDH3B1P43353 468 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 SPCS3P61009 180 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 SLC3A1Q07837 685 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 ZC2HC1CQ53FD0 456 aaPredicted RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 PRAMEF13Q5VWM6 474 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 VTCN1Q7Z7D3 282 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 KLBQ86Z14 1044 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 CPA5Q8WXQ8 436 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 SLC35A4Q96G79 324 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 KCNK16Q96T55 309 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 GSX2Q9BZM3 304 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 HDHD2Q9H0R4 259 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 PRMT7Q9NVM4 692 aaPredicted RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 PGPEP1Q9NXJ5 209 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 MORF4L1Q9UBU8 362 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 KCNK6Q9Y257 313 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 SEC14L5O43304 696 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 MAGEC1O60732 1142 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 DNAJA2O60884 412 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 ZNF865P0CJ78 1059 aaPredicted RBP8.86□□□□□ -0.99
UBR4-201ENST00000375218 LIG4P49917 911 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 VSNL1P62760 191 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 CACNB1Q02641 598 aaPredicted RBP8.86□□□□□ -0.99
UBR4-201ENST00000375218 TSC22D1Q15714 1073 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 PRAMEF19Q5SWL8 479 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 CCDC103Q8IW40 242 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 FAM185AQ8N0U4 392 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 ZIM3Q96PE6 472 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 CYP2S1Q96SQ9 504 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 FGFBP2Q9BYJ0 223 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 C6orf62Q9GZU0 229 aaPredicted RBP8.86□□□□□ -0.99
UBR4-201ENST00000375218 MARCH7Q9H992 704 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 FOLH1BQ9HBA9 442 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 RMND1Q9NWS8 449 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 MS4A12Q9NXJ0 267 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 CTTNBP2NLQ9P2B4 639 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 CTNNAL1Q9UBT7 734 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 TBC1D30Q9Y2I9 924 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 ZNF175Q9Y473 711 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 SLC22A7Q9Y694 548 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 TRIM49BA6NDI0 452 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 CFAP73A6NFT4 308 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 LINC00587B1AMM8 73 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 MATN2O00339 956 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 OAZ2O95190 189 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 PIK3R1P27986 724 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 RBL1P28749 1068 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 CLDN8P56748 225 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 SMAD3P84022 425 aaKnown RBP8.86□□□□□ -0.99
UBR4-201ENST00000375218 CXCL9Q07325 125 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 MRPL49Q13405 166 aaKnown RBP8.86□□□□□ -0.99
UBR4-201ENST00000375218 CAMK4Q16566 473 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 MSANTD2Q6P1R3 559 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 CYP20A1Q6UW02 462 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 ETV3LQ6ZN32 361 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 BIVMQ86UB2 503 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 TAC4Q86UU9 113 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 CCDC28AQ8IWP9 274 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 RP9Q8TA86 221 aaKnown RBP8.86□□□□□ -0.99
UBR4-201ENST00000375218 COPS5Q92905 334 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 PPP1R2P1Q96PQ5 205 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 ADGRE3Q9BY15 652 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 GSDMCQ9BYG8 508 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 COA1Q9GZY4 146 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 MMP27Q9H306 513 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 TDRD3Q9H7E2 651 aaKnown RBP8.86□□□□□ -0.99
UBR4-201ENST00000375218 TNFRSF10DQ9UBN6 386 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 NOCTQ9UK39 431 aaKnown RBP8.86□□□□□ -0.99
UBR4-201ENST00000375218 PCDHA6Q9UN73 950 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 DOCK3Q8IZD9 2030 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 FAM237BA0A1B0GVD1 139 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 A0A1B0GVL5 298 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 KLK10O43240 276 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 OPHN1O60890 802 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 LPLP06858 475 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 TGM1P22735 817 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 STAT6P42226 847 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 ARSFP54793 590 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 PCDH1Q08174 1060 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 TP53BP2Q13625 1128 aa8.86□□□□□ -0.99
UBR4-201ENST00000375218 IL10RAQ13651 578 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms