RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 PTGS2P35354 604 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 SLC26A3P40879 764 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 SNX16P57768 344 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 AHSA2Q719I0 299 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 FBXL6Q8N531 539 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 NUDT8Q8WV74 236 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 SLC7A6Q92536 515 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 UBE2FQ969M7 185 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 TEKT5Q96M29 485 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 RETREG1Q9H6L5 497 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 PKP3Q9Y446 797 aa20.24■□□□□ 0.83
TMEFF1-201ENST00000374879 SLC12A8A0AV02 714 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 ITGAMP11215 1152 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 ITGA2P17301 1181 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 MATKP42679 507 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 CTSKP43235 329 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 ARPP19P56211 112 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 CXCR4P61073 352 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 CD83Q01151 205 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 LAPTM4AQ15012 233 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 GPAT3Q53EU6 434 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 OTUD1Q5VV17 481 aaPredicted RBP20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 SCIMPQ6UWF3 145 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 EFL1Q7Z2Z2 1120 aaKnown RBP20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 CYP4Z1Q86W10 505 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 FAM149B1Q96BN6 582 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 RHBDF1Q96CC6 855 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 Q96MT0 163 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 ZNF583Q96ND8 569 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 PRMT7Q9NVM4 692 aaPredicted RBP20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 ABI2Q9NYB9 513 aaPredicted RBP20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 A0A0G2JMZ2 1700 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 LRRC37A2A6NM11 1700 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 HCRTO43612 131 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 HBP1O60381 514 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 MAGEA11P43364 429 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 PLA2G4EQ3MJ16 856 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 SLC25A52Q3SY17 297 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 ZC3H12BQ5HYM0 836 aaKnown RBP20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 BNIPLQ7Z465 357 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 DPP9Q86TI2 863 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 RYBPQ8N488 228 aaPredicted RBP20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 PPHLN1Q8NEY8 458 aaKnown RBP20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 OR52K2Q8NGK3 314 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 CCDC120Q96HB5 630 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 CDH9Q9ULB4 789 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 BRCA1P38398 1863 aaKnown RBP20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 PNMA8CA0A1B0GUJ8 204 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 FADS2P1A8MWK0 482 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 RECQL5O94762 991 aaPredicted RBP20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 IGFBP5P24593 272 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 ADORA2BP29275 332 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 HECTD2Q5U5R9 776 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 KIAA0319Q5VV43 1072 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 SPATA19Q7Z5L4 167 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 CCDC190Q86UF4 302 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 ADHFE1Q8IWW8 467 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 IPMKQ8NFU5 416 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 SLC39A13Q96H72 371 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 BARD1Q99728 777 aaKnown RBP20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 MMP28Q9H239 520 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 RASSF1Q9NS23 344 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 POLHQ9Y253 713 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 LYVE1Q9Y5Y7 322 aa20.23■□□□□ 0.83
TMEFF1-201ENST00000374879 MIA3Q5JRA6 1907 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 LINC00854A0A1B0GVQ3 168 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 GSTA4O15217 222 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 BAG6P46379 1132 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 PPP3CCP48454 512 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 SCNN1GP51170 649 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 SLC10A6Q3KNW5 377 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 ESCO2Q56NI9 601 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 SYPL2Q5VXT5 272 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 LSM14AQ8ND56 463 aaKnown RBP20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 TOR1AIP2Q8NFQ8 470 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 PEX13Q92968 403 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 TBL1YQ9BQ87 522 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 NOS1APO75052 506 aaPredicted RBP20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 SERPINF2P08697 491 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 TXNP10599 105 aaKnown RBP20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 KRT20P35900 424 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 HUNKP57058 714 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 PFKFB4Q16877 469 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 RFX4Q33E94 735 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 FBXO48Q5FWF7 155 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 KDELC2Q7Z4H8 507 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 PIM3Q86V86 326 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 OR4M1Q8NGD0 313 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 BRSK1Q8TDC3 778 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 PPP1R13LQ8WUF5 828 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 TRNT1Q96Q11 434 aaKnown RBP20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 FDXACB1Q9BRP7 624 aaPredicted RBP20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 DPEP3Q9H4B8 488 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 GORASP2Q9H8Y8 452 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 GMPPBQ9Y5P6 360 aa20.22■□□□□ 0.83
TMEFF1-201ENST00000374879 POLR2AP24928 1970 aaKnown RBP20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 CNMDO75829 334 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 CYP7B1O75881 506 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 C22orf31O95567 290 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 GSTM1P09488 218 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms