RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 C2orf81A6NN90 581 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 HACD1B0YJ81 288 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 BTN3A3O00478 584 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 BTN3A1O00481 513 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 ADRA1AP35348 466 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 MARCKSL1P49006 195 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 MSLNQ13421 630 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-202ENST00000374426 ATP1A4Q13733 1029 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 NCF4Q15080 339 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 ZNF658BQ4V348 819 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-202ENST00000374426 RANBP10Q6VN20 620 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 MED25Q71SY5 747 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 HPS6Q86YV9 775 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 PNPLA2Q96AD5 504 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 DCUN1D1Q96GG9 259 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 SMAD5Q99717 465 aaKnown RBP13.38□□□□□ -0.27
CXCL12-202ENST00000374426 APOL2Q9BQE5 337 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 KLHL25Q9H0H3 589 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 OR52A5Q9H2C5 316 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 C10orf88Q9H8K7 445 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 CASS4Q9NQ75 786 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 CRLS1Q9UJA2 301 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 INTUQ9ULD6 942 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 G3BP2Q9UN86 482 aaKnown RBP13.38□□□□□ -0.27
CXCL12-202ENST00000374426 ALG6Q9Y672 507 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 PIKFYVEQ9Y2I7 2098 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 C17orf113A0A1B0GUU1 675 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 CCDC66A2RUB6 948 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 MFAP3LO75121 409 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 ANXA9O76027 345 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 ZRANB2O95218 330 aaKnown RBP eCLIP13.37□□□□□ -0.27
CXCL12-202ENST00000374426 PVRP15151 417 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 RBL1P28749 1068 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 GEMP55040 296 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 RRADP55042 308 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 RAPSNQ13702 412 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 ZNF385CQ66K41 422 aaPredicted RBP13.37□□□□□ -0.27
CXCL12-202ENST00000374426 CDHR3Q6ZTQ4 885 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 KATNAL2Q8IYT4 538 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 NXPE1Q8N323 547 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 OR52E1Q8NGJ3 308 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 OR13C4Q8NGS5 318 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 C19orf60Q96EN9 201 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 TRAPPC9Q96Q05 1148 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 FERD3LQ96RJ6 166 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 ANP32EQ9BTT0 268 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 COG4Q9H9E3 785 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 SERTAD3Q9UJW9 196 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 CSMD1Q96PZ7 3565 aa13.37□□□□□ -0.27
CXCL12-202ENST00000374426 FER1L5A0AVI2 2057 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 E7EQ34 232 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 ZNF749O43361 778 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 KRT86O43790 486 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 KLF7O75840 302 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-202ENST00000374426 DDAH2O95865 285 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 RALBP11234 206 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 ATP1B2P14415 290 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-202ENST00000374426 VARSP26640 1264 aaKnown RBP13.36□□□□□ -0.27
CXCL12-202ENST00000374426 PDHA2P29803 388 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 ZNF140P52738 457 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-202ENST00000374426 HADHBP55084 474 aaKnown RBP13.36□□□□□ -0.27
CXCL12-202ENST00000374426 MICALCLQ6ZW33 695 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 BBS12Q6ZW61 710 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 MRGPREQ86SM8 312 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 CCDC50Q8IVM0 306 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 VSTM4Q8IW00 320 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 RCOR2Q8IZ40 523 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 ADGRF3Q8IZF5 1079 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 PHC3Q8NDX5 983 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 PRR7Q8TB68 274 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 ULK4Q96C45 1275 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 RBM41Q96IZ5 413 aaKnown RBP13.36□□□□□ -0.27
CXCL12-202ENST00000374426 COPS8Q99627 209 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 DPH2Q9BQC3 489 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-202ENST00000374426 HEMGNQ9BXL5 484 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 SLC29A3Q9BZD2 475 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 TFB2MQ9H5Q4 396 aaKnown RBP13.36□□□□□ -0.27
CXCL12-202ENST00000374426 FAM96AQ9H5X1 160 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 MAP10Q9P2G4 905 aa13.36□□□□□ -0.27
CXCL12-202ENST00000374426 CNTRLQ7Z7A1 2325 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 IGLV3-16A0A075B6K0 115 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 WIPF3A6NGB9 483 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 C9J4A7 227 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 CFAP99D6REC4 459 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 H3BMH7 237 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 H7C0C1 242 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 APOC4-APOC2K7ER74 178 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 IFRD1O00458 451 aaPredicted RBP13.35□□□□□ -0.27
CXCL12-202ENST00000374426 CCL22O00626 93 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 CRTAMO95727 393 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 APOC2P02655 101 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 ITGALP20701 1170 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 PSMB4P28070 264 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 OTX2P32243 289 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 ATP5OP48047 213 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 CD151P48509 253 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 CDKN1CP49918 316 aaPredicted RBP13.35□□□□□ -0.27
CXCL12-202ENST00000374426 TMPRSS15P98073 1019 aa13.35□□□□□ -0.27
CXCL12-202ENST00000374426 PLEKHN1Q494U1 663 aaPredicted RBP13.35□□□□□ -0.27
CXCL12-202ENST00000374426 VWA5B1Q5TIE3 1220 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms