RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 FNDC5Q8NAU1 212 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 TMIEQ8NEW7 156 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 PIP4K2CQ8TBX8 421 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 RSRC1Q96IZ7 334 aaKnown RBP19.18■□□□□ 0.66
HDAC1-201ENST00000373548 NTMT1Q9BV86 223 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 THG1LQ9NWX6 298 aaKnown RBP19.18■□□□□ 0.66
HDAC1-201ENST00000373548 TMEM181Q9P2C4 612 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 GFYI3L273 518 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 PSMD11O00231 422 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 WNT9AO14904 365 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 LSM1O15116 133 aaKnown RBP19.18■□□□□ 0.66
HDAC1-201ENST00000373548 ANGPT2O15123 496 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 MAP3K7O43318 606 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 EPB42P16452 691 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 ATP6V1C1P21283 382 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 GGT5P36269 586 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 UFM1P61960 85 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 PDCD4Q53EL6 469 aaKnown RBP19.18■□□□□ 0.66
HDAC1-201ENST00000373548 LDLRAP1Q5SW96 308 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 NRSN1Q8IZ57 195 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 RASGEF1AQ8N9B8 481 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 TERB1Q8NA31 727 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 BHLHE22Q8NFJ8 381 aaPredicted RBP19.18■□□□□ 0.66
HDAC1-201ENST00000373548 LRCH3Q96II8 777 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 COQ10AQ96MF6 247 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 TMEM245Q9H330 911 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 SUCOQ9UBS9 1254 aaKnown RBP19.18■□□□□ 0.66
HDAC1-201ENST00000373548 RNF11Q9Y3C5 154 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 CCL27Q9Y4X3 112 aa19.18■□□□□ 0.66
HDAC1-201ENST00000373548 C5orf42Q9H799 3197 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 PRORSD1PA6NEY8 169 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 TMEM202A6NGA9 273 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 LOC730098B7Z3J9 87 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 FFAR3O14843 346 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 GPR42O15529 346 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 FTH1P02794 183 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 EPORP19235 508 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 CTSCP53634 463 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 SP140Q13342 867 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 RCAN2Q14206 197 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 ELAVL3Q14576 367 aaKnown RBP19.17■□□□□ 0.66
HDAC1-201ENST00000373548 PPP2R2DQ66LE6 453 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 NEK10Q6ZWH5 1172 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 TSPEARQ8WU66 669 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 SPDL1Q96EA4 605 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 DTD2Q96FN9 168 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 FAM129BQ96TA1 746 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 GPATCH1Q9BRR8 931 aaKnown RBP19.17■□□□□ 0.66
HDAC1-201ENST00000373548 TRIM54Q9BYV2 358 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 SLC32A1Q9H598 525 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 MRPL40Q9NQ50 206 aaKnown RBP19.17■□□□□ 0.66
HDAC1-201ENST00000373548 HEBP1Q9NRV9 189 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 CD300AQ9UGN4 299 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 TRPS1Q9UHF7 1281 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 BCAP29Q9UHQ4 241 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 RANBP2P49792 3224 aaKnown RBP19.17■□□□□ 0.66
HDAC1-201ENST00000373548 ZFC3H1O60293 1989 aaKnown RBP19.17■□□□□ 0.66
HDAC1-201ENST00000373548 MYO9BQ13459 2157 aa19.17■□□□□ 0.66
HDAC1-201ENST00000373548 PLK4O00444 970 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 EBLN1P0CF75 366 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 ACADSP16219 412 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 OPRD1P41143 372 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 PIK3CGP48736 1102 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 ATXN3P54252 364 aaPredicted RBP19.16■□□□□ 0.66
HDAC1-201ENST00000373548 NR6A1Q15406 480 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 RASGRP3Q8IV61 690 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 RAVER1Q8IY67 606 aaKnown RBP19.16■□□□□ 0.66
HDAC1-201ENST00000373548 ASZ1Q8WWH4 475 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 ASB9Q96DX5 294 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 CDCA3Q99618 268 aaPredicted RBP19.16■□□□□ 0.66
HDAC1-201ENST00000373548 ZFP14Q9HCL3 533 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 COQ6Q9Y2Z9 468 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 ANTXRLA6NF34 631 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 H0Y858 1186 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 FXYD1O00168 92 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 SLC16A5O15375 505 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 SLC22A3O75751 556 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 SLCO2B1O94956 709 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 SLC7A2P52569 658 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 MRPS22P82650 360 aaKnown RBP19.16■□□□□ 0.66
HDAC1-201ENST00000373548 EMX2Q04743 252 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 TRIM25Q14258 630 aaKnown RBP19.16■□□□□ 0.66
HDAC1-201ENST00000373548 COQ5Q5HYK3 327 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 FBXL19Q6PCT2 694 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 TTC23LQ6PF05 361 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 P2RY13Q9BPV8 354 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 IL1RL2Q9HB29 575 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 ZIM2Q9NZV7 527 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 FAM8A1Q9UBU6 413 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 KLQ9UEF7 1012 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 DENND4AQ7Z401 1863 aa19.16■□□□□ 0.66
HDAC1-201ENST00000373548 A0A1W2PP18 115 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 KRT87PA6NCN2 255 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 ASPDHA6ND91 283 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 RFXAPO00287 272 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 QSOX1O00391 747 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 AREL1O15033 823 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 INPP4BO15327 924 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 TSPAN6O43657 245 aa19.15■□□□□ 0.66
HDAC1-201ENST00000373548 HIST1H2AGP0C0S8 130 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms