RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 DPP10Q8N608 796 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 SH3BP1Q9Y3L3 701 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 TGM5O43548 720 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 RASAL1O95294 804 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 CDH2P19022 906 aaPredicted RBP23.35■■□□□ 1.33
CDK9-201ENST00000373264 HTR1EP28566 365 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 CCR7P32248 378 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 PTSQ03393 145 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 CPSF6Q16630 551 aaKnown RBP eCLIP23.35■■□□□ 1.33
CDK9-201ENST00000373264 OR2AP1Q8NGE2 309 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 PYCR2Q96C36 320 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 PHF12Q96QT6 1004 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 HERC2P3Q9BVR0 1158 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 PFDN4Q9NQP4 134 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 DMTF1Q9Y222 760 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 LATS1O95835 1130 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 ZNF23P17027 643 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 NEK2P51955 445 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 SLC36A3Q495N2 470 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 SLC39A5Q6ZMH5 540 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 VRK3Q8IV63 474 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 ZNF689Q96CS4 500 aaPredicted RBP23.34■■□□□ 1.33
CDK9-201ENST00000373264 ZNF583Q96ND8 569 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 C9orf16Q9BUW7 83 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 VCX3AQ9NNX9 186 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 SLCO3A1Q9UIG8 710 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 IGSF6O95976 241 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 TCF3P15923 654 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 NFKBIAP25963 317 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 YAP1P46937 504 aaKnown RBP23.34■■□□□ 1.33
CDK9-201ENST00000373264 IST1P53990 364 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 PLCL1Q15111 1095 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 ZIK1Q3SY52 487 aaPredicted RBP23.34■■□□□ 1.33
CDK9-201ENST00000373264 B3GNT6Q6ZMB0 384 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 MSRB3Q8IXL7 192 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 C10orf111Q8N326 155 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 ACDQ96AP0 544 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 TBCDQ9BTW9 1192 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 RNF208Q9H0X6 261 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 ZDHHC6Q9H6R6 413 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 NTN4Q9HB63 628 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 SLC25A37Q9NYZ2 338 aa23.34■■□□□ 1.33
CDK9-201ENST00000373264 PLXNB3Q9ULL4 1909 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.33■■□□□ 1.33
CDK9-201ENST00000373264 SEC22BO75396 215 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 NKG7Q16617 165 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 TTC33Q6PID6 262 aaPredicted RBP23.33■■□□□ 1.33
CDK9-201ENST00000373264 MACC1Q6ZN28 852 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 CHST15Q7LFX5 561 aaPredicted RBP23.33■■□□□ 1.33
CDK9-201ENST00000373264 PHACTR4Q8IZ21 702 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 RNF175Q8N4F7 328 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 OR10A6Q8NH74 314 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 FIG4Q92562 907 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 NSMCE2Q96MF7 247 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 CFHR5Q9BXR6 569 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 CLK4Q9HAZ1 481 aaKnown RBP23.33■■□□□ 1.33
CDK9-201ENST00000373264 LTB4R2Q9NPC1 389 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 HCFC1R1Q9NWW0 138 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 PTTG2Q9NZH5 202 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 FAM8A1Q9UBU6 413 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 LSM7Q9UK45 103 aaKnown RBP23.33■■□□□ 1.33
CDK9-201ENST00000373264 TMPRSS11EQ9UL52 423 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 PADI4Q9UM07 663 aa23.33■■□□□ 1.33
CDK9-201ENST00000373264 NUP214P35658 2090 aaPredicted RBP23.33■■□□□ 1.33
CDK9-201ENST00000373264 AREL1O15033 823 aa23.33■■□□□ 1.32
CDK9-201ENST00000373264 C1QCP02747 245 aa23.33■■□□□ 1.32
CDK9-201ENST00000373264 ITGB8P26012 769 aa23.33■■□□□ 1.32
CDK9-201ENST00000373264 HSPA14Q0VDF9 509 aa23.33■■□□□ 1.32
CDK9-201ENST00000373264 PPP1R8Q12972 351 aaKnown RBP23.33■■□□□ 1.32
CDK9-201ENST00000373264 ENPP6Q6UWR7 440 aa23.33■■□□□ 1.32
CDK9-201ENST00000373264 TMC8Q8IU68 726 aa23.33■■□□□ 1.32
CDK9-201ENST00000373264 CHST14Q8NCH0 376 aa23.33■■□□□ 1.32
CDK9-201ENST00000373264 SLC22A17Q8WUG5 538 aa23.33■■□□□ 1.32
CDK9-201ENST00000373264 SKA2Q8WVK7 121 aaPredicted RBP23.33■■□□□ 1.32
CDK9-201ENST00000373264 SLC13A3Q8WWT9 602 aa23.33■■□□□ 1.32
CDK9-201ENST00000373264 GTF2H4Q92759 462 aa23.33■■□□□ 1.32
CDK9-201ENST00000373264 ASIC4Q96FT7 647 aa23.33■■□□□ 1.32
CDK9-201ENST00000373264 AURKBQ96GD4 344 aaPredicted RBP23.33■■□□□ 1.32
CDK9-201ENST00000373264 SPG21Q9NZD8 308 aa23.33■■□□□ 1.32
CDK9-201ENST00000373264 K7EPI3 171 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 FKTNO75072 461 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 ULK1O75385 1050 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 UGT2B4P06133 528 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 JAK1P23458 1154 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 SERPINA4P29622 427 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 PWP1Q13610 501 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 CYBRD1Q53TN4 286 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 ANKRD34AQ69YU3 496 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 PAPD5Q8NDF8 572 aaKnown RBP23.32■■□□□ 1.32
CDK9-201ENST00000373264 MRPS31Q92665 395 aaKnown RBP23.32■■□□□ 1.32
CDK9-201ENST00000373264 BEGAINQ9BUH8 593 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 HTATIP2Q9BUP3 242 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 SLC46A2Q9BY10 475 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 PAK6Q9NQU5 681 aaPredicted RBP23.32■■□□□ 1.32
CDK9-201ENST00000373264 KIAA1522Q9P206 1035 aaPredicted RBP23.32■■□□□ 1.32
CDK9-201ENST00000373264 ATP11BQ9Y2G3 1177 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 ZNF106Q9H2Y7 1883 aaKnown RBP23.32■■□□□ 1.32
CDK9-201ENST00000373264 MANBAO00462 879 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 LDLRP01130 860 aa23.32■■□□□ 1.32
CDK9-201ENST00000373264 MYF6P23409 242 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms