RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 PRKG2Q13237 762 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 TLR1Q15399 786 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 PAGE3Q5JUK9 113 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 PLEKHS1Q5SXH7 462 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 CYP2R1Q6VVX0 501 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 UBE2R2Q712K3 238 aaPredicted RBP13.12□□□□□ -0.31
CSTF2-201ENST00000372972 DET1Q7L5Y6 550 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 TICAM1Q8IUC6 712 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 TMEM102Q8N9M5 508 aaPredicted RBP13.12□□□□□ -0.31
CSTF2-201ENST00000372972 HCAR2Q8TDS4 363 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 SCAMP4Q969E2 229 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 SLC45A3Q96JT2 553 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 PPP3R2Q96LZ3 170 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 LRRC3BQ96PB8 259 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 HBEGFQ99075 208 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 SLC12A9Q9BXP2 914 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 LMAN2LQ9H0V9 348 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 PARVBQ9HBI1 364 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 DUS2Q9NX74 493 aaKnown RBP13.12□□□□□ -0.31
CSTF2-201ENST00000372972 CMTM6Q9NX76 183 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 ARL15Q9NXU5 204 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 DLGAP2Q9P1A6 1054 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 TRPS1Q9UHF7 1281 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 MBD1Q9UIS9 605 aaPredicted RBP13.12□□□□□ -0.31
CSTF2-201ENST00000372972 PDE10AQ9Y233 779 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 CCL27Q9Y4X3 112 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 PCDHA9Q9Y5H5 950 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 ANKRD12Q6UB98 2062 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 CEP290O15078 2479 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.12□□□□□ -0.31
CSTF2-201ENST00000372972 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.12□□□□□ -0.31
CSTF2-201ENST00000372972 CFAP99D6REC4 459 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 SLC28A1O00337 649 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 RGS14O43566 566 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 ULK1O75385 1050 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 WDR47O94967 919 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 ASLP04424 464 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 CISD3P0C7P0 127 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 MPC1LP0DKB6 136 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 G6PDP11413 515 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 XPAP23025 273 aaPredicted RBP13.12□□□□□ -0.31
CSTF2-201ENST00000372972 IL12AP29459 219 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 DGKGP49619 791 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 BNIP2Q12982 314 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 SMU1Q2TAY7 513 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 RFTN2Q52LD8 501 aaPredicted RBP13.12□□□□□ -0.31
CSTF2-201ENST00000372972 ZNF805Q5CZA5 627 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 MBOAT1Q6ZNC8 495 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 Q6ZVL8 140 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 ZFAND4Q86XD8 727 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 ASB11Q8WXH4 323 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 EFHD1Q9BUP0 239 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 SLC32A1Q9H598 525 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 DKK3Q9UBP4 350 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 MSRAQ9UJ68 235 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 RNF11Q9Y3C5 154 aa13.12□□□□□ -0.31
CSTF2-201ENST00000372972 DPPA5A6NC42 116 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 LOC730098B7Z3J9 87 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 IFRD1O00458 451 aaPredicted RBP13.11□□□□□ -0.31
CSTF2-201ENST00000372972 FFAR3O14843 346 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 GPR42O15529 346 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 AP2A2O94973 939 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 CTSLP07711 333 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 LYNP07948 512 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 HIST1H2AGP0C0S8 130 aaPredicted RBP13.11□□□□□ -0.31
CSTF2-201ENST00000372972 ADH5P11766 374 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 HIST1H2ADP20671 130 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 CREB5Q02930 508 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 FOLH1Q04609 750 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 KCNC3Q14003 757 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 IRAK1BP1Q5VVH5 260 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 CYP20A1Q6UW02 462 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 TRIM46Q7Z4K8 759 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 TCAIMQ8N3R3 496 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 TRAM1L1Q8N609 369 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 OR2T34Q8NGX1 318 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 OR2T3Q8NH03 318 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 DNAJB14Q8TBM8 379 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 WFIKKN2Q8TEU8 576 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 SKA2Q8WVK7 121 aaPredicted RBP13.11□□□□□ -0.31
CSTF2-201ENST00000372972 TMEM125Q96AQ2 219 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 SLCO4A1Q96BD0 722 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 MIEF2Q96C03 454 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 TIFAQ96CG3 184 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 RSPRY1Q96DX4 576 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 HIST1H2AHQ96KK5 128 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 HIST1H2AJQ99878 128 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 H2AFJQ9BTM1 129 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 TRIM15Q9C019 465 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 GMPR2Q9P2T1 348 aaKnown RBP13.11□□□□□ -0.31
CSTF2-201ENST00000372972 KLQ9UEF7 1012 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 GRXCR2A6NFK2 248 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 RFXAPO00287 272 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 SLC16A5O15375 505 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 PAPLNO95428 1278 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 CLDN9O95484 217 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 CYP17A1P05093 508 aa13.11□□□□□ -0.31
CSTF2-201ENST00000372972 UBTFL6P0CB48 400 aaPredicted RBP13.11□□□□□ -0.31
CSTF2-201ENST00000372972 SLC2A4P14672 509 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms